Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 FP325331.1-202ENST00000623531 1380 ntBASIC15.08■□□□□ 0
HIST3H2BBQ8N257 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 PCDHA12-202ENST00000613593 2588 ntBASIC15.08■□□□□ 0
HIST3H2BBQ8N257 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.08■□□□□ 0
HIST3H2BBQ8N257 SMPD5-203ENST00000639008 1464 ntBASIC15.08■□□□□ 0
HIST3H2BBQ8N257 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC15.07■□□□□ 0
HIST3H2BBQ8N257 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 AC092720.2-201ENST00000602388 1665 ntBASIC15.06■□□□□ 0
HIST3H2BBQ8N257 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST3H2BBQ8N257 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.05■□□□□ 0
HIST3H2BBQ8N257 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 NRG1-221ENST00000614767 762 ntTSL 5 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST3H2BBQ8N257 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms