Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00528Q8N1L1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00528Q8N1L1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00528Q8N1L1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00528Q8N1L1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00528Q8N1L1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00528Q8N1L1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00528Q8N1L1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 AL512625.2-201ENST00000417533 625 ntBASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 AL365223.1-201ENST00000574864 1297 ntBASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00528Q8N1L1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00528Q8N1L1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00528Q8N1L1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00528Q8N1L1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00528Q8N1L1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 AC097658.1-201ENST00000475555 843 ntBASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 AL132657.2-201ENST00000564417 358 ntBASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 AC007952.6-201ENST00000573168 2673 ntBASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 AC003957.1-201ENST00000625108 2673 ntBASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 AC073314.1-201ENST00000568729 2216 ntBASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 AC003102.1-202ENST00000563394 1796 ntBASIC13.2□□□□□ -0.3
LINC00528Q8N1L1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 RN7SKP199-201ENST00000410325 305 ntBASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 POU5F1P4-201ENST00000413175 1085 ntBASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 AL392088.1-201ENST00000428364 670 ntBASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 AL049829.1-201ENST00000465411 156 ntBASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.19□□□□□ -0.3
LINC00528Q8N1L1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms