Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC30.08■■■□□ 2.41
ABCA6Q8N139 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ABCA6Q8N139 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC30.07■■■□□ 2.4
ABCA6Q8N139 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA6Q8N139 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA6Q8N139 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC30.07■■■□□ 2.4
ABCA6Q8N139 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
ABCA6Q8N139 UPK3BP1-201ENST00000428678 509 ntBASIC30.07■■■□□ 2.4
ABCA6Q8N139 ISCU-203ENST00000431221 799 ntTSL 2 BASIC30.07■■■□□ 2.4
ABCA6Q8N139 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA6Q8N139 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA6Q8N139 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC30.07■■■□□ 2.4
ABCA6Q8N139 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA6Q8N139 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA6Q8N139 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC30.07■■■□□ 2.4
ABCA6Q8N139 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ABCA6Q8N139 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.07■■■□□ 2.4
ABCA6Q8N139 AL358472.4-201ENST00000633140 710 ntBASIC30.07■■■□□ 2.4
ABCA6Q8N139 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
ABCA6Q8N139 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA6Q8N139 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
ABCA6Q8N139 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA6Q8N139 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
ABCA6Q8N139 AC027702.1-201ENST00000563810 1770 ntBASIC30.06■■■□□ 2.4
ABCA6Q8N139 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA6Q8N139 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ABCA6Q8N139 AC063952.2-201ENST00000498792 1227 ntBASIC30.06■■■□□ 2.4
ABCA6Q8N139 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC30.06■■■□□ 2.4
ABCA6Q8N139 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
ABCA6Q8N139 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC30.06■■■□□ 2.4
ABCA6Q8N139 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC30.06■■■□□ 2.4
ABCA6Q8N139 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.06■■■□□ 2.4
ABCA6Q8N139 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ABCA6Q8N139 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ABCA6Q8N139 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
ABCA6Q8N139 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
ABCA6Q8N139 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ABCA6Q8N139 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ABCA6Q8N139 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC30.04■■■□□ 2.4
ABCA6Q8N139 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 TOLLIP-AS1-201ENST00000530897 939 ntBASIC30.04■■■□□ 2.4
ABCA6Q8N139 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC30.04■■■□□ 2.4
ABCA6Q8N139 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.04■■■□□ 2.4
ABCA6Q8N139 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
ABCA6Q8N139 B3GAT3P1-201ENST00000471720 806 ntBASIC30.04■■■□□ 2.4
ABCA6Q8N139 FAM87A-204ENST00000613235 858 ntBASIC30.04■■■□□ 2.4
ABCA6Q8N139 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA6Q8N139 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA6Q8N139 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA6Q8N139 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA6Q8N139 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ABCA6Q8N139 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC30.03■■■□□ 2.4
ABCA6Q8N139 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
ABCA6Q8N139 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC30.03■■■□□ 2.4
ABCA6Q8N139 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC30.02■■■□□ 2.4
ABCA6Q8N139 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA6Q8N139 C9orf163-202ENST00000624034 2573 ntBASIC30.02■■■□□ 2.4
ABCA6Q8N139 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA6Q8N139 GOLGA2P6-201ENST00000340929 2049 ntBASIC30.02■■■□□ 2.4
ABCA6Q8N139 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA6Q8N139 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC30.02■■■□□ 2.4
ABCA6Q8N139 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
ABCA6Q8N139 TSPY14P-201ENST00000303979 915 ntBASIC30.02■■■□□ 2.4
ABCA6Q8N139 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC30.02■■■□□ 2.4
ABCA6Q8N139 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC30.02■■■□□ 2.4
ABCA6Q8N139 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
ABCA6Q8N139 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ABCA6Q8N139 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA6Q8N139 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA6Q8N139 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA6Q8N139 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 AL031985.4-201ENST00000642138 673 ntBASIC30.01■■■□□ 2.39
ABCA6Q8N139 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 ME2-208ENST00000638937 2471 ntTSL 5 BASIC30.01■■■□□ 2.39
ABCA6Q8N139 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ABCA6Q8N139 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30■■■□□ 2.39
ABCA6Q8N139 INGX-201ENST00000359239 846 ntBASIC30■■■□□ 2.39
ABCA6Q8N139 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC30■■■□□ 2.39
ABCA6Q8N139 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC30■■■□□ 2.39
ABCA6Q8N139 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC30■■■□□ 2.39
ABCA6Q8N139 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC30■■■□□ 2.39
ABCA6Q8N139 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
ABCA6Q8N139 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC30■■■□□ 2.39
ABCA6Q8N139 AC011484.1-201ENST00000377652 1995 ntBASIC30■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms