Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC28.18■■■□□ 2.1
XRN1Q8IZH2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
XRN1Q8IZH2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 C9orf163-202ENST00000624034 2573 ntBASIC28.16■■■□□ 2.1
XRN1Q8IZH2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
XRN1Q8IZH2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC28.15■■■□□ 2.1
XRN1Q8IZH2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
XRN1Q8IZH2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
XRN1Q8IZH2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
XRN1Q8IZH2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
XRN1Q8IZH2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
XRN1Q8IZH2 B3GAT3P1-201ENST00000471720 806 ntBASIC28.14■■■□□ 2.1
XRN1Q8IZH2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC28.14■■■□□ 2.09
XRN1Q8IZH2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
XRN1Q8IZH2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.09
XRN1Q8IZH2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
XRN1Q8IZH2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC28.14■■■□□ 2.09
XRN1Q8IZH2 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC28.14■■■□□ 2.09
XRN1Q8IZH2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 AC087388.1-201ENST00000571370 1112 ntBASIC28.13■■■□□ 2.09
XRN1Q8IZH2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
XRN1Q8IZH2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 PPP1R14BP5-201ENST00000440334 435 ntBASIC28.12■■■□□ 2.09
XRN1Q8IZH2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 AL031985.4-201ENST00000642138 673 ntBASIC28.12■■■□□ 2.09
XRN1Q8IZH2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC28.12■■■□□ 2.09
XRN1Q8IZH2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms