Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 AC005363.2-201ENST00000618631 242 ntBASIC21.34■■□□□ 1.01
RNF135Q8IUD6 AC105020.6-201ENST00000621523 1217 ntBASIC21.34■■□□□ 1.01
RNF135Q8IUD6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF135Q8IUD6 AC026310.3-201ENST00000625186 2373 ntBASIC21.33■■□□□ 1.01
RNF135Q8IUD6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF135Q8IUD6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF135Q8IUD6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RNF135Q8IUD6 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF135Q8IUD6 CYP21A1P-202ENST00000354927 1481 ntBASIC21.32■■□□□ 1
RNF135Q8IUD6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
RNF135Q8IUD6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.32■■□□□ 1
RNF135Q8IUD6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.32■■□□□ 1
RNF135Q8IUD6 AC007322.3-201ENST00000426526 701 ntBASIC21.32■■□□□ 1
RNF135Q8IUD6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.32■■□□□ 1
RNF135Q8IUD6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
RNF135Q8IUD6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.32■■□□□ 1
RNF135Q8IUD6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.32■■□□□ 1
RNF135Q8IUD6 AC145285.6-201ENST00000604632 637 ntBASIC21.32■■□□□ 1
RNF135Q8IUD6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 MIR6786-201ENST00000616843 113 ntBASIC21.32■■□□□ 1
RNF135Q8IUD6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF135Q8IUD6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
RNF135Q8IUD6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RNF135Q8IUD6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RNF135Q8IUD6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 AC005521.1-201ENST00000393351 872 ntBASIC21.31■■□□□ 1
RNF135Q8IUD6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 AL355355.2-201ENST00000442321 338 ntBASIC21.31■■□□□ 1
RNF135Q8IUD6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.31■■□□□ 1
RNF135Q8IUD6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.31■■□□□ 1
RNF135Q8IUD6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RNF135Q8IUD6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RNF135Q8IUD6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF135Q8IUD6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.3■■□□□ 1
RNF135Q8IUD6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RNF135Q8IUD6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RNF135Q8IUD6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms