Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRRC28Q86X40 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 AC092437.1-201ENST00000624794 1048 ntBASIC17.85■□□□□ 0.45
LRRC28Q86X40 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.85■□□□□ 0.45
LRRC28Q86X40 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 AC137761.2-201ENST00000561729 223 ntBASIC17.84■□□□□ 0.45
LRRC28Q86X40 AC145350.3-201ENST00000569033 163 ntBASIC17.84■□□□□ 0.45
LRRC28Q86X40 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.84■□□□□ 0.45
LRRC28Q86X40 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRRC28Q86X40 AL158211.5-201ENST00000623583 2518 ntBASIC17.83■□□□□ 0.45
LRRC28Q86X40 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC28Q86X40 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
LRRC28Q86X40 AC125437.2-201ENST00000625180 2167 ntBASIC17.83■□□□□ 0.45
LRRC28Q86X40 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.83■□□□□ 0.45
LRRC28Q86X40 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRRC28Q86X40 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC28Q86X40 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC28Q86X40 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.83■□□□□ 0.44
LRRC28Q86X40 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC28Q86X40 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.83■□□□□ 0.44
LRRC28Q86X40 AC104187.1-201ENST00000607510 612 ntBASIC17.83■□□□□ 0.44
LRRC28Q86X40 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LRRC28Q86X40 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LRRC28Q86X40 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC28Q86X40 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRRC28Q86X40 AC004408.2-201ENST00000623613 2777 ntBASIC17.83■□□□□ 0.44
LRRC28Q86X40 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC28Q86X40 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 AC016769.1-201ENST00000409132 1010 ntBASIC17.82■□□□□ 0.44
LRRC28Q86X40 AC006015.1-201ENST00000429970 570 ntBASIC17.82■□□□□ 0.44
LRRC28Q86X40 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.82■□□□□ 0.44
LRRC28Q86X40 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.82■□□□□ 0.44
LRRC28Q86X40 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 AC092720.2-201ENST00000602388 1665 ntBASIC17.82■□□□□ 0.44
LRRC28Q86X40 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC28Q86X40 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.82■□□□□ 0.44
LRRC28Q86X40 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRRC28Q86X40 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC28Q86X40 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC28Q86X40 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC28Q86X40 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC28Q86X40 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC28Q86X40 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC28Q86X40 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
LRRC28Q86X40 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.81■□□□□ 0.44
LRRC28Q86X40 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms