Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 AC068338.2-201ENST00000563278 1430 ntBASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.01■□□□□ 0.79
ZC3HC1Q86WB0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 AC100791.3-201ENST00000617619 330 ntBASIC20■□□□□ 0.79
ZC3HC1Q86WB0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 PTBP1P-201ENST00000554374 1601 ntBASIC20■□□□□ 0.79
ZC3HC1Q86WB0 TMEM179-206ENST00000616017 1645 ntBASIC20■□□□□ 0.79
ZC3HC1Q86WB0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZC3HC1Q86WB0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 AL158211.5-201ENST00000623583 2518 ntBASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 AC016769.1-201ENST00000409132 1010 ntBASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 AC006015.1-201ENST00000429970 570 ntBASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZC3HC1Q86WB0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 AC011767.1-201ENST00000617410 1153 ntBASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZC3HC1Q86WB0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
ZC3HC1Q86WB0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZC3HC1Q86WB0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms