Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CSMD3Q7Z407 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 BET1L-202ENST00000332865 533 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 AC026396.1-201ENST00000419388 421 ntBASIC14.09□□□□□ -0.15
CSMD3Q7Z407 TPM4P1-201ENST00000436100 807 ntBASIC14.09□□□□□ -0.15
CSMD3Q7Z407 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CSMD3Q7Z407 TSPY14P-201ENST00000303979 915 ntBASIC14.08□□□□□ -0.15
CSMD3Q7Z407 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD3Q7Z407 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CSMD3Q7Z407 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD3Q7Z407 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.08□□□□□ -0.15
CSMD3Q7Z407 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CSMD3Q7Z407 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 FAM87A-204ENST00000613235 858 ntBASIC14.08□□□□□ -0.16
CSMD3Q7Z407 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 AC022616.7-201ENST00000525383 220 ntBASIC14.08□□□□□ -0.16
CSMD3Q7Z407 AC010203.1-204ENST00000548782 407 ntBASIC14.08□□□□□ -0.16
CSMD3Q7Z407 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CSMD3Q7Z407 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.07□□□□□ -0.16
CSMD3Q7Z407 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 AL358472.4-201ENST00000633140 710 ntBASIC14.07□□□□□ -0.16
CSMD3Q7Z407 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CSMD3Q7Z407 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD3Q7Z407 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD3Q7Z407 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CSMD3Q7Z407 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms