Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.82■□□□□ 0.6
RTL4Q6ZR62 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RTL4Q6ZR62 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 AC083880.1-201ENST00000608266 535 ntBASIC18.81■□□□□ 0.6
RTL4Q6ZR62 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 AC011484.1-201ENST00000377652 1995 ntBASIC18.81■□□□□ 0.6
RTL4Q6ZR62 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RTL4Q6ZR62 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 AC087633.2-202ENST00000565166 1439 ntBASIC18.8■□□□□ 0.6
RTL4Q6ZR62 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RTL4Q6ZR62 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 RNA5SP413-201ENST00000516373 109 ntBASIC18.79■□□□□ 0.6
RTL4Q6ZR62 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 AC105020.6-201ENST00000621523 1217 ntBASIC18.79■□□□□ 0.6
RTL4Q6ZR62 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 GABARAPL3-202ENST00000624044 1851 ntBASIC18.79■□□□□ 0.6
RTL4Q6ZR62 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 AL391422.3-201ENST00000603791 2761 ntBASIC18.79■□□□□ 0.6
RTL4Q6ZR62 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RTL4Q6ZR62 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTL4Q6ZR62 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms