Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 AL139246.5-201ENST00000606645 996 ntBASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BLOC1S3Q6QNY0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 AC019069.1-201ENST00000610008 1333 ntBASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.16■□□□□ 0.66
BLOC1S3Q6QNY0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 CDV3P1-201ENST00000471403 739 ntBASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 TERF1P2-201ENST00000583350 1212 ntBASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 TNXA-203ENST00000507684 2038 ntBASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BLOC1S3Q6QNY0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BLOC1S3Q6QNY0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BLOC1S3Q6QNY0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BLOC1S3Q6QNY0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 AC123595.1-201ENST00000440769 1046 ntBASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BLOC1S3Q6QNY0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.13■□□□□ 0.65
BLOC1S3Q6QNY0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms