Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 AC073111.5-205ENST00000641717 521 ntBASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF549Q6P9A3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 KRT18P68-201ENST00000392293 1000 ntBASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 CDCA4P2-201ENST00000441182 718 ntBASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 AC093787.1-201ENST00000450396 207 ntBASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 CYP2T3P-201ENST00000601990 817 ntBASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 AC069236.1-201ENST00000604339 616 ntBASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 AC005181.1-201ENST00000604782 1256 ntBASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF549Q6P9A3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 AC010980.2-201ENST00000587099 1412 ntBASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 OR10C1-204ENST00000622521 1039 ntBASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ZNF549Q6P9A3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 PTBP1P-201ENST00000554374 1601 ntBASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 RAP2CP1-201ENST00000605103 478 ntBASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 AL137784.2-201ENST00000607332 1000 ntBASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 AC105020.6-201ENST00000621523 1217 ntBASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF549Q6P9A3 BX119927.1-201ENST00000636596 1552 ntBASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 AL050303.2-201ENST00000619798 666 ntBASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 AC008694.1-202ENST00000636953 945 ntBASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ZNF549Q6P9A3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF549Q6P9A3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms