Protein–RNA interactions for Protein: Q5VW36

FOCAD, Focadhesin, humanhuman

Predictions only

Length 1,801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOCADQ5VW36 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.81■■□□□ 1.4
FOCADQ5VW36 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.81■■□□□ 1.4
FOCADQ5VW36 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FOCADQ5VW36 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
FOCADQ5VW36 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOCADQ5VW36 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOCADQ5VW36 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.81■■□□□ 1.4
FOCADQ5VW36 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
FOCADQ5VW36 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
FOCADQ5VW36 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 AL353708.3-201ENST00000610272 989 ntBASIC23.8■■□□□ 1.4
FOCADQ5VW36 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC23.8■■□□□ 1.4
FOCADQ5VW36 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
FOCADQ5VW36 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.8■■□□□ 1.4
FOCADQ5VW36 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.8■■□□□ 1.4
FOCADQ5VW36 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FOCADQ5VW36 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOCADQ5VW36 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOCADQ5VW36 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOCADQ5VW36 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOCADQ5VW36 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.79■■□□□ 1.4
FOCADQ5VW36 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.79■■□□□ 1.4
FOCADQ5VW36 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.79■■□□□ 1.4
FOCADQ5VW36 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.79■■□□□ 1.4
FOCADQ5VW36 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FOCADQ5VW36 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.79■■□□□ 1.4
FOCADQ5VW36 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOCADQ5VW36 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
FOCADQ5VW36 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
FOCADQ5VW36 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOCADQ5VW36 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOCADQ5VW36 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOCADQ5VW36 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.78■■□□□ 1.4
FOCADQ5VW36 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOCADQ5VW36 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
FOCADQ5VW36 NBPF21P-201ENST00000425093 1451 ntBASIC23.78■■□□□ 1.4
FOCADQ5VW36 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOCADQ5VW36 YBX1P10-201ENST00000444752 975 ntBASIC23.77■■□□□ 1.4
FOCADQ5VW36 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 PRKY-204ENST00000533551 1019 ntBASIC23.77■■□□□ 1.4
FOCADQ5VW36 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOCADQ5VW36 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FOCADQ5VW36 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
FOCADQ5VW36 DPP3P2-201ENST00000416030 1696 ntBASIC23.77■■□□□ 1.4
FOCADQ5VW36 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
FOCADQ5VW36 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
FOCADQ5VW36 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FOCADQ5VW36 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
FOCADQ5VW36 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.75■■□□□ 1.39
FOCADQ5VW36 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.75■■□□□ 1.39
FOCADQ5VW36 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FOCADQ5VW36 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.75■■□□□ 1.39
FOCADQ5VW36 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
FOCADQ5VW36 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
FOCADQ5VW36 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms