Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
VARS2Q5ST30 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VARS2Q5ST30 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VARS2Q5ST30 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VARS2Q5ST30 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
VARS2Q5ST30 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 SNORA78-201ENST00000459373 127 ntBASIC21.37■■□□□ 1.01
VARS2Q5ST30 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 AL121829.2-201ENST00000620908 328 ntBASIC21.37■■□□□ 1.01
VARS2Q5ST30 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 AC006128.1-201ENST00000624704 1661 ntBASIC21.37■■□□□ 1.01
VARS2Q5ST30 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.37■■□□□ 1.01
VARS2Q5ST30 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VARS2Q5ST30 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.36■■□□□ 1.01
VARS2Q5ST30 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.36■■□□□ 1.01
VARS2Q5ST30 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 RPS2P55-201ENST00000397318 883 ntBASIC21.36■■□□□ 1.01
VARS2Q5ST30 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.36■■□□□ 1.01
VARS2Q5ST30 AC012618.2-201ENST00000428058 849 ntBASIC21.36■■□□□ 1.01
VARS2Q5ST30 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 AC107956.1-201ENST00000494359 873 ntBASIC21.36■■□□□ 1.01
VARS2Q5ST30 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
VARS2Q5ST30 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.36■■□□□ 1.01
VARS2Q5ST30 AC233702.5-201ENST00000584107 538 ntBASIC21.36■■□□□ 1.01
VARS2Q5ST30 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 AC010331.1-201ENST00000611423 582 ntBASIC21.36■■□□□ 1.01
VARS2Q5ST30 AC073912.3-201ENST00000624414 853 ntBASIC21.36■■□□□ 1.01
VARS2Q5ST30 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VARS2Q5ST30 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VARS2Q5ST30 HLA-G-202ENST00000376815 851 ntBASIC21.35■■□□□ 1.01
VARS2Q5ST30 HLA-G-203ENST00000376818 1127 ntBASIC21.35■■□□□ 1.01
VARS2Q5ST30 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VARS2Q5ST30 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VARS2Q5ST30 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VARS2Q5ST30 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.35■■□□□ 1.01
VARS2Q5ST30 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
VARS2Q5ST30 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.34■■□□□ 1.01
VARS2Q5ST30 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.34■■□□□ 1.01
VARS2Q5ST30 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.34■■□□□ 1.01
VARS2Q5ST30 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.34■■□□□ 1.01
VARS2Q5ST30 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.34■■□□□ 1.01
VARS2Q5ST30 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.34■■□□□ 1.01
VARS2Q5ST30 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.34■■□□□ 1.01
VARS2Q5ST30 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VARS2Q5ST30 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VARS2Q5ST30 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VARS2Q5ST30 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VARS2Q5ST30 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VARS2Q5ST30 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VARS2Q5ST30 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VARS2Q5ST30 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.33■■□□□ 1.01
VARS2Q5ST30 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1
VARS2Q5ST30 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
VARS2Q5ST30 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
VARS2Q5ST30 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms