Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 GCSHP5-201ENST00000443090 522 ntBASIC17.74■□□□□ 0.43
FREM1Q5H8C1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.74■□□□□ 0.43
FREM1Q5H8C1 AC120498.8-201ENST00000614275 531 ntBASIC17.74■□□□□ 0.43
FREM1Q5H8C1 LINC01006-201ENST00000333319 2292 ntBASIC17.74■□□□□ 0.43
FREM1Q5H8C1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
FREM1Q5H8C1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 AC093827.2-201ENST00000512654 315 ntBASIC17.73■□□□□ 0.43
FREM1Q5H8C1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.73■□□□□ 0.43
FREM1Q5H8C1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 AC128676.1-201ENST00000454392 318 ntBASIC17.72■□□□□ 0.43
FREM1Q5H8C1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.72■□□□□ 0.43
FREM1Q5H8C1 MTDHP1-201ENST00000605323 784 ntBASIC17.72■□□□□ 0.43
FREM1Q5H8C1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
FREM1Q5H8C1 PCDHAC2-203ENST00000615316 3011 ntBASIC17.71■□□□□ 0.42
FREM1Q5H8C1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
FREM1Q5H8C1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
FREM1Q5H8C1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms