Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
KHDC1Q4VXA5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 AL512625.2-201ENST00000417533 625 ntBASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.33■□□□□ 0.85
KHDC1Q4VXA5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KHDC1Q4VXA5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 AL355472.2-201ENST00000422958 438 ntBASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 MKRN4P-201ENST00000444706 1521 ntBASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.32■□□□□ 0.84
KHDC1Q4VXA5 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 AL138781.1-201ENST00000566567 1274 ntBASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
KHDC1Q4VXA5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 AC098934.4-201ENST00000564127 592 ntBASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 CYP21A1P-202ENST00000354927 1481 ntBASIC20.3■□□□□ 0.84
KHDC1Q4VXA5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KHDC1Q4VXA5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms