Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL10A1Q03692 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
COL10A1Q03692 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.96■□□□□ 0.3
COL10A1Q03692 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COL10A1Q03692 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 DPP3P2-201ENST00000416030 1696 ntBASIC16.95■□□□□ 0.3
COL10A1Q03692 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.95■□□□□ 0.3
COL10A1Q03692 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 AC026185.1-201ENST00000445748 174 ntBASIC16.95■□□□□ 0.3
COL10A1Q03692 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL10A1Q03692 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.95■□□□□ 0.3
COL10A1Q03692 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.95■□□□□ 0.3
COL10A1Q03692 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL10A1Q03692 AL162377.1-201ENST00000618844 1793 ntBASIC16.94■□□□□ 0.3
COL10A1Q03692 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COL10A1Q03692 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.94■□□□□ 0.3
COL10A1Q03692 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.94■□□□□ 0.3
COL10A1Q03692 KRT18P68-201ENST00000392293 1000 ntBASIC16.94■□□□□ 0.3
COL10A1Q03692 AL355472.2-201ENST00000422958 438 ntBASIC16.94■□□□□ 0.3
COL10A1Q03692 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.94■□□□□ 0.3
COL10A1Q03692 AC093787.1-201ENST00000450396 207 ntBASIC16.94■□□□□ 0.3
COL10A1Q03692 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.94■□□□□ 0.3
COL10A1Q03692 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
COL10A1Q03692 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL10A1Q03692 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.94■□□□□ 0.3
COL10A1Q03692 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.94■□□□□ 0.3
COL10A1Q03692 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
COL10A1Q03692 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL10A1Q03692 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.93■□□□□ 0.3
COL10A1Q03692 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.93■□□□□ 0.3
COL10A1Q03692 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL10A1Q03692 MIR663A-201ENST00000385250 93 ntBASIC16.93■□□□□ 0.3
COL10A1Q03692 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.93■□□□□ 0.3
COL10A1Q03692 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.93■□□□□ 0.3
COL10A1Q03692 CYP2T3P-201ENST00000601990 817 ntBASIC16.93■□□□□ 0.3
COL10A1Q03692 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
COL10A1Q03692 AC010980.2-201ENST00000587099 1412 ntBASIC16.93■□□□□ 0.3
COL10A1Q03692 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
COL10A1Q03692 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.93■□□□□ 0.3
COL10A1Q03692 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL10A1Q03692 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL10A1Q03692 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
COL10A1Q03692 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.92■□□□□ 0.3
COL10A1Q03692 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 AC105020.6-201ENST00000621523 1217 ntBASIC16.92■□□□□ 0.3
COL10A1Q03692 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.92■□□□□ 0.3
COL10A1Q03692 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL10A1Q03692 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
COL10A1Q03692 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
COL10A1Q03692 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.92■□□□□ 0.3
COL10A1Q03692 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL10A1Q03692 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms