Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.18■□□□□ 0.5
RPS4XP62701 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.18■□□□□ 0.5
RPS4XP62701 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RPS4XP62701 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RPS4XP62701 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.18■□□□□ 0.5
RPS4XP62701 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RPS4XP62701 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
RPS4XP62701 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.17■□□□□ 0.5
RPS4XP62701 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RPS4XP62701 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.17■□□□□ 0.5
RPS4XP62701 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPS4XP62701 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.17■□□□□ 0.5
RPS4XP62701 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RPS4XP62701 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.17■□□□□ 0.5
RPS4XP62701 GUSBP6-202ENST00000438529 1198 ntBASIC18.17■□□□□ 0.5
RPS4XP62701 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RPS4XP62701 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.17■□□□□ 0.5
RPS4XP62701 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RPS4XP62701 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 BX119927.1-201ENST00000636596 1552 ntBASIC18.17■□□□□ 0.5
RPS4XP62701 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RPS4XP62701 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RPS4XP62701 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RPS4XP62701 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 CNN2P6-201ENST00000439038 900 ntBASIC18.16■□□□□ 0.5
RPS4XP62701 KRT18P6-201ENST00000555540 1265 ntBASIC18.16■□□□□ 0.5
RPS4XP62701 AC105036.2-201ENST00000569468 176 ntBASIC18.16■□□□□ 0.5
RPS4XP62701 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.16■□□□□ 0.5
RPS4XP62701 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.16■□□□□ 0.5
RPS4XP62701 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RPS4XP62701 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RPS4XP62701 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
RPS4XP62701 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RPS4XP62701 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.16■□□□□ 0.5
RPS4XP62701 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.16■□□□□ 0.5
RPS4XP62701 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4XP62701 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.15■□□□□ 0.5
RPS4XP62701 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4XP62701 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.15■□□□□ 0.5
RPS4XP62701 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4XP62701 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.15■□□□□ 0.5
RPS4XP62701 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RPS4XP62701 AL138781.1-201ENST00000566567 1274 ntBASIC18.15■□□□□ 0.5
RPS4XP62701 AC133552.2-202ENST00000575694 574 ntBASIC18.15■□□□□ 0.5
RPS4XP62701 AC100791.3-201ENST00000617619 330 ntBASIC18.15■□□□□ 0.5
RPS4XP62701 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.15■□□□□ 0.5
RPS4XP62701 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.15■□□□□ 0.5
RPS4XP62701 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RPS4XP62701 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RPS4XP62701 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.15■□□□□ 0.5
RPS4XP62701 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.14■□□□□ 0.5
RPS4XP62701 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RPS4XP62701 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RPS4XP62701 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RPS4XP62701 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.14■□□□□ 0.49
RPS4XP62701 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.14■□□□□ 0.49
RPS4XP62701 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.14■□□□□ 0.49
RPS4XP62701 RARRES2P4-201ENST00000514074 484 ntBASIC18.14■□□□□ 0.49
RPS4XP62701 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.14■□□□□ 0.49
RPS4XP62701 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RPS4XP62701 AC133041.1-202ENST00000642053 222 ntBASIC18.14■□□□□ 0.49
RPS4XP62701 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RPS4XP62701 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms