Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL158211.5-201ENST00000623583 2518 ntBASIC19.67■□□□□ 0.74
CDH13P55290 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.67■□□□□ 0.74
CDH13P55290 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CDH13P55290 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.67■□□□□ 0.74
CDH13P55290 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.66■□□□□ 0.74
CDH13P55290 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.66■□□□□ 0.74
CDH13P55290 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDH13P55290 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH13P55290 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CDH13P55290 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.66■□□□□ 0.74
CDH13P55290 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CDH13P55290 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH13P55290 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CDH13P55290 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH13P55290 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH13P55290 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CDH13P55290 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.66■□□□□ 0.74
CDH13P55290 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CDH13P55290 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
CDH13P55290 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH13P55290 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH13P55290 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
CDH13P55290 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH13P55290 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.65■□□□□ 0.74
CDH13P55290 AC097381.1-201ENST00000429019 1296 ntBASIC19.65■□□□□ 0.74
CDH13P55290 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH13P55290 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH13P55290 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.65■□□□□ 0.74
CDH13P55290 AL591742.1-201ENST00000604433 565 ntBASIC19.65■□□□□ 0.74
CDH13P55290 AC087623.3-201ENST00000607047 1098 ntBASIC19.65■□□□□ 0.74
CDH13P55290 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDH13P55290 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.65■□□□□ 0.74
CDH13P55290 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH13P55290 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDH13P55290 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH13P55290 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.65■□□□□ 0.74
CDH13P55290 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDH13P55290 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH13P55290 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH13P55290 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH13P55290 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH13P55290 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDH13P55290 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CDH13P55290 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CDH13P55290 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.64■□□□□ 0.73
CDH13P55290 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH13P55290 AL356652.1-201ENST00000615962 565 ntBASIC19.64■□□□□ 0.73
CDH13P55290 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH13P55290 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.64■□□□□ 0.73
CDH13P55290 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDH13P55290 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDH13P55290 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH13P55290 BX119927.1-201ENST00000636596 1552 ntBASIC19.63■□□□□ 0.73
CDH13P55290 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
CDH13P55290 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH13P55290 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.63■□□□□ 0.73
CDH13P55290 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.63■□□□□ 0.73
CDH13P55290 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.63■□□□□ 0.73
CDH13P55290 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.63■□□□□ 0.73
CDH13P55290 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.63■□□□□ 0.73
CDH13P55290 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 AC016405.3-201ENST00000607710 860 ntBASIC19.63■□□□□ 0.73
CDH13P55290 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDH13P55290 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CDH13P55290 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDH13P55290 CYP21A1P-202ENST00000354927 1481 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms