Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.7■□□□□ 0.58
PSMD4P55036 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PSMD4P55036 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.7■□□□□ 0.58
PSMD4P55036 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PSMD4P55036 NCF1B-203ENST00000435988 1254 ntBASIC18.7■□□□□ 0.58
PSMD4P55036 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.7■□□□□ 0.58
PSMD4P55036 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.7■□□□□ 0.58
PSMD4P55036 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PSMD4P55036 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.7■□□□□ 0.58
PSMD4P55036 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PSMD4P55036 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
PSMD4P55036 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PSMD4P55036 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.69■□□□□ 0.58
PSMD4P55036 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 AC092667.1-201ENST00000434301 2586 ntBASIC18.69■□□□□ 0.58
PSMD4P55036 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.69■□□□□ 0.58
PSMD4P55036 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.69■□□□□ 0.58
PSMD4P55036 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.69■□□□□ 0.58
PSMD4P55036 AC090192.1-201ENST00000517740 490 ntBASIC18.69■□□□□ 0.58
PSMD4P55036 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PSMD4P55036 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.69■□□□□ 0.58
PSMD4P55036 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.69■□□□□ 0.58
PSMD4P55036 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PSMD4P55036 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PSMD4P55036 AL355472.2-201ENST00000422958 438 ntBASIC18.68■□□□□ 0.58
PSMD4P55036 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.68■□□□□ 0.58
PSMD4P55036 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.68■□□□□ 0.58
PSMD4P55036 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.68■□□□□ 0.58
PSMD4P55036 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.68■□□□□ 0.58
PSMD4P55036 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.68■□□□□ 0.58
PSMD4P55036 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PSMD4P55036 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PSMD4P55036 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PSMD4P55036 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMD4P55036 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 BX276092.2-201ENST00000417668 665 ntBASIC18.67■□□□□ 0.58
PSMD4P55036 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PSMD4P55036 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMD4P55036 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMD4P55036 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.67■□□□□ 0.58
PSMD4P55036 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.67■□□□□ 0.58
PSMD4P55036 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PSMD4P55036 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 AL162377.1-201ENST00000618844 1793 ntBASIC18.67■□□□□ 0.58
PSMD4P55036 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.67■□□□□ 0.58
PSMD4P55036 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PSMD4P55036 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMD4P55036 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.66■□□□□ 0.58
PSMD4P55036 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms