Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDE1AP54750 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.62■■□□□ 1.53
PDE1AP54750 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.62■■□□□ 1.53
PDE1AP54750 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC24.62■■□□□ 1.53
PDE1AP54750 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PDE1AP54750 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDE1AP54750 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.61■■□□□ 1.53
PDE1AP54750 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 MIPEPP3-201ENST00000412105 444 ntBASIC24.61■■□□□ 1.53
PDE1AP54750 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.61■■□□□ 1.53
PDE1AP54750 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
PDE1AP54750 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.61■■□□□ 1.53
PDE1AP54750 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.61■■□□□ 1.53
PDE1AP54750 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.61■■□□□ 1.53
PDE1AP54750 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.61■■□□□ 1.53
PDE1AP54750 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PDE1AP54750 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC24.61■■□□□ 1.53
PDE1AP54750 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
PDE1AP54750 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE1AP54750 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.6■■□□□ 1.53
PDE1AP54750 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.6■■□□□ 1.53
PDE1AP54750 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.6■■□□□ 1.53
PDE1AP54750 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
PDE1AP54750 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.6■■□□□ 1.53
PDE1AP54750 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE1AP54750 NXN-202ENST00000537628 1340 ntTSL 3 BASIC24.6■■□□□ 1.53
PDE1AP54750 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 TSPY6P-201ENST00000448518 926 ntBASIC24.59■■□□□ 1.53
PDE1AP54750 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.59■■□□□ 1.53
PDE1AP54750 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PDE1AP54750 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PDE1AP54750 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 KRT8P17-201ENST00000453110 1448 ntBASIC24.59■■□□□ 1.53
PDE1AP54750 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.59■■□□□ 1.53
PDE1AP54750 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE1AP54750 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDE1AP54750 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDE1AP54750 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
PDE1AP54750 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
PDE1AP54750 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.58■■□□□ 1.53
PDE1AP54750 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.58■■□□□ 1.53
PDE1AP54750 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
PDE1AP54750 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.58■■□□□ 1.53
PDE1AP54750 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDE1AP54750 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.58■■□□□ 1.52
PDE1AP54750 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.58■■□□□ 1.52
PDE1AP54750 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.58■■□□□ 1.52
PDE1AP54750 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
PDE1AP54750 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.57■■□□□ 1.52
PDE1AP54750 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.57■■□□□ 1.52
PDE1AP54750 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.57■■□□□ 1.52
PDE1AP54750 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.57■■□□□ 1.52
PDE1AP54750 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.57■■□□□ 1.52
PDE1AP54750 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.57■■□□□ 1.52
PDE1AP54750 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE1AP54750 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.56■■□□□ 1.52
PDE1AP54750 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PDE1AP54750 GPX1P1-201ENST00000388829 606 ntBASIC24.56■■□□□ 1.52
PDE1AP54750 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.56■■□□□ 1.52
PDE1AP54750 AL031963.3-201ENST00000606441 850 ntBASIC24.56■■□□□ 1.52
PDE1AP54750 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.56■■□□□ 1.52
PDE1AP54750 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms