Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 DGR1YNL130C-A 147 nt2.38□□□□□ -2.03
HDA1P53973 SPF1YEL031W 3648 nt2.38□□□□□ -2.03
HDA1P53973 UBP15YMR304W 3693 nt2.38□□□□□ -2.03
HDA1P53973 YRB1YDR002W 606 nt2.37□□□□□ -2.03
HDA1P53973 YBL012CYBL012C 402 nt2.37□□□□□ -2.03
HDA1P53973 YOR376WYOR376W 369 nt2.37□□□□□ -2.03
HDA1P53973 PRP39YML046W 1890 nt2.37□□□□□ -2.03
HDA1P53973 YDL007C-AYDL007C-A 258 nt2.36□□□□□ -2.03
HDA1P53973 SRP14YDL092W 441 nt2.36□□□□□ -2.03
HDA1P53973 YOR170WYOR170W 306 nt2.36□□□□□ -2.03
HDA1P53973 YCL046WYCL046W 324 nt2.36□□□□□ -2.03
HDA1P53973 SPP41YDR464W 4308 nt2.36□□□□□ -2.03
HDA1P53973 DCP2YNL118C 2913 nt2.36□□□□□ -2.03
HDA1P53973 EDS1YBR033W 2760 nt2.36□□□□□ -2.03
HDA1P53973 NIP100YPL174C 2607 nt2.36□□□□□ -2.03
HDA1P53973 ZRG17YNR039C 1818 nt2.35□□□□□ -2.03
HDA1P53973 MRP10YDL045W-A 288 nt2.35□□□□□ -2.03
HDA1P53973 MSC6YOR354C 2079 nt2.35□□□□□ -2.03
HDA1P53973 MET18YIL128W 3099 nt2.35□□□□□ -2.03
HDA1P53973 UBR1YGR184C 5853 nt2.34□□□□□ -2.03
HDA1P53973 SPC98YNL126W 2541 nt2.34□□□□□ -2.03
HDA1P53973 snR74snR74 88 nt2.34□□□□□ -2.03
HDA1P53973 YIR030W-AYIR030W-A 384 nt2.34□□□□□ -2.03
HDA1P53973 ZIP1YDR285W 2628 nt2.34□□□□□ -2.04
HDA1P53973 IRA2YOL081W 9240 nt2.34□□□□□ -2.04
HDA1P53973 SGF11YPL047W 300 nt2.33□□□□□ -2.04
HDA1P53973 ELG1YOR144C 2376 nt2.32□□□□□ -2.04
HDA1P53973 MCM10YIL150C 1716 nt2.32□□□□□ -2.04
HDA1P53973 SEC31YDL195W 3822 nt2.32□□□□□ -2.04
HDA1P53973 YKL165C-AYKL165C-A 234 nt2.32□□□□□ -2.04
HDA1P53973 TOF1YNL273W 3717 nt2.31□□□□□ -2.04
HDA1P53973 SAS3YBL052C 2496 nt2.31□□□□□ -2.04
HDA1P53973 YDR003W-AYDR003W-A 123 nt2.31□□□□□ -2.04
HDA1P53973 YGL217CYGL217C 342 nt2.31□□□□□ -2.04
HDA1P53973 ANS1YHR126C 480 nt2.31□□□□□ -2.04
HDA1P53973 VPS8YAL002W 3825 nt2.31□□□□□ -2.04
HDA1P53973 TUS1YLR425W 3924 nt2.31□□□□□ -2.04
HDA1P53973 NOP14YDL148C 2433 nt2.3□□□□□ -2.04
HDA1P53973 TIM9YEL020W-A 264 nt2.3□□□□□ -2.04
HDA1P53973 ULI1YFR026C 510 nt2.3□□□□□ -2.04
HDA1P53973 BRE1YDL074C 2103 nt2.3□□□□□ -2.04
HDA1P53973 TRL1YJL087C 2484 nt2.29□□□□□ -2.04
HDA1P53973 YHR180W-AYHR180W-A 183 nt2.29□□□□□ -2.04
HDA1P53973 YLR154W-AYLR154W-A 186 nt2.29□□□□□ -2.04
HDA1P53973 YOR108C-AYOR108C-A 210 nt2.29□□□□□ -2.04
HDA1P53973 RAV1YJR033C 4074 nt2.29□□□□□ -2.04
HDA1P53973 RLM1YPL089C 2031 nt2.29□□□□□ -2.04
HDA1P53973 GYP5YPL249C 2685 nt2.28□□□□□ -2.04
HDA1P53973 MAK10YEL053C 2202 nt2.28□□□□□ -2.04
HDA1P53973 ZIP2YGL249W 2115 nt2.28□□□□□ -2.04
HDA1P53973 RPL34BYIL052C 366 nt2.28□□□□□ -2.04
HDA1P53973 RPS17AYML024W 411 nt2.28□□□□□ -2.04
HDA1P53973 YNL097C-BYNL097C-B 123 nt2.28□□□□□ -2.04
HDA1P53973 YBR131C-AYBR131C-A 90 nt2.28□□□□□ -2.04
HDA1P53973 CDC60YPL160W 3273 nt2.28□□□□□ -2.04
HDA1P53973 SSD1YDR293C 3753 nt2.27□□□□□ -2.05
HDA1P53973 ECM12YHR021W-A 456 nt2.27□□□□□ -2.05
HDA1P53973 YMR242W-AYMR242W-A 90 nt2.27□□□□□ -2.05
HDA1P53973 snR52snR52 92 nt2.27□□□□□ -2.05
HDA1P53973 YOL098CYOL098C 3114 nt2.26□□□□□ -2.05
HDA1P53973 YDR341CYDR341C 1824 nt2.26□□□□□ -2.05
HDA1P53973 YNL170WYNL170W 396 nt2.26□□□□□ -2.05
HDA1P53973 GIP3YPL137C 3831 nt2.26□□□□□ -2.05
HDA1P53973 snR46snR46 197 nt2.26□□□□□ -2.05
HDA1P53973 STH1YIL126W 4080 nt2.26□□□□□ -2.05
HDA1P53973 BNI1YNL271C 5862 nt2.25□□□□□ -2.05
HDA1P53973 SPO75YLL005C 2607 nt2.25□□□□□ -2.05
HDA1P53973 YPR097WYPR097W 3222 nt2.25□□□□□ -2.05
HDA1P53973 RPS25BYLR333C 327 nt2.25□□□□□ -2.05
HDA1P53973 YOR072W-BYOR072W-B 162 nt2.25□□□□□ -2.05
HDA1P53973 PET309YLR067C 2898 nt2.25□□□□□ -2.05
HDA1P53973 SPO21YOL091W 1830 nt2.24□□□□□ -2.05
HDA1P53973 YDR182W-AYDR182W-A 204 nt2.24□□□□□ -2.05
HDA1P53973 KIP1YBL063W 3336 nt2.24□□□□□ -2.05
HDA1P53973 NAM7YMR080C 2916 nt2.24□□□□□ -2.05
HDA1P53973 HSH155YMR288W 2916 nt2.23□□□□□ -2.05
HDA1P53973 RAD34YDR314C 2079 nt2.23□□□□□ -2.05
HDA1P53973 YBR174CYBR174C 315 nt2.23□□□□□ -2.05
HDA1P53973 SYH1YPL105C 2550 nt2.22□□□□□ -2.05
HDA1P53973 RGA1YOR127W 3024 nt2.22□□□□□ -2.05
HDA1P53973 MAD1YGL086W 2250 nt2.21□□□□□ -2.06
HDA1P53973 YER172C-AYER172C-A 381 nt2.21□□□□□ -2.06
HDA1P53973 YJL120WYJL120W 324 nt2.21□□□□□ -2.06
HDA1P53973 MLH3YPL164C 2148 nt2.21□□□□□ -2.06
HDA1P53973 LRE1YCL051W 1752 nt2.21□□□□□ -2.06
HDA1P53973 CAT2YML042W 2013 nt2.2□□□□□ -2.06
HDA1P53973 HMI1YOL095C 2121 nt2.2□□□□□ -2.06
HDA1P53973 YIR044CYIR044C 186 nt2.2□□□□□ -2.06
HDA1P53973 YKR075W-AYKR075W-A 270 nt2.2□□□□□ -2.06
HDA1P53973 ENV11YGR071C 2583 nt2.2□□□□□ -2.06
HDA1P53973 APL2YKL135C 2181 nt2.2□□□□□ -2.06
HDA1P53973 NOC3YLR002C 1992 nt2.19□□□□□ -2.06
HDA1P53973 USO1YDL058W 5373 nt2.19□□□□□ -2.06
HDA1P53973 CHC1YGL206C 4962 nt2.19□□□□□ -2.06
HDA1P53973 RTT107YHR154W 3213 nt2.19□□□□□ -2.06
HDA1P53973 CTR9YOL145C 3234 nt2.19□□□□□ -2.06
HDA1P53973 RPL37BYDR500C 267 nt2.19□□□□□ -2.06
HDA1P53973 COF1YLL050C 432 nt2.19□□□□□ -2.06
HDA1P53973 BUD2YKL092C 3315 nt2.19□□□□□ -2.06
HDA1P53973 SEC16YPL085W 6588 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 119.9 ms