Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.71■□□□□ 0.91
COPAP53621 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.71■□□□□ 0.91
COPAP53621 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COPAP53621 AP006294.2-201ENST00000641667 209 ntBASIC20.71■□□□□ 0.91
COPAP53621 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPAP53621 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
COPAP53621 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
COPAP53621 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.71■□□□□ 0.91
COPAP53621 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.71■□□□□ 0.91
COPAP53621 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPAP53621 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COPAP53621 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COPAP53621 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPAP53621 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COPAP53621 FEM1AP1-201ENST00000431297 1995 ntBASIC20.7■□□□□ 0.9
COPAP53621 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COPAP53621 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
COPAP53621 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COPAP53621 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.7■□□□□ 0.9
COPAP53621 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPAP53621 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COPAP53621 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPAP53621 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPAP53621 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.7■□□□□ 0.9
COPAP53621 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COPAP53621 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
COPAP53621 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.69■□□□□ 0.9
COPAP53621 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.69■□□□□ 0.9
COPAP53621 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.69■□□□□ 0.9
COPAP53621 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.69■□□□□ 0.9
COPAP53621 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.69■□□□□ 0.9
COPAP53621 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COPAP53621 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.69■□□□□ 0.9
COPAP53621 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COPAP53621 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.69■□□□□ 0.9
COPAP53621 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 AC087633.2-202ENST00000565166 1439 ntBASIC20.69■□□□□ 0.9
COPAP53621 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COPAP53621 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.69■□□□□ 0.9
COPAP53621 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.68■□□□□ 0.9
COPAP53621 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COPAP53621 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPAP53621 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COPAP53621 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPAP53621 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.68■□□□□ 0.9
COPAP53621 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COPAP53621 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPAP53621 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPAP53621 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.68■□□□□ 0.9
COPAP53621 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPAP53621 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COPAP53621 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
COPAP53621 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COPAP53621 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COPAP53621 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.68■□□□□ 0.9
COPAP53621 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.68■□□□□ 0.9
COPAP53621 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.67■□□□□ 0.9
COPAP53621 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COPAP53621 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
COPAP53621 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.67■□□□□ 0.9
COPAP53621 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.67■□□□□ 0.9
COPAP53621 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COPAP53621 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COPAP53621 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 SOX15-203ENST00000570788 1093 ntBASIC20.67■□□□□ 0.9
COPAP53621 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.67■□□□□ 0.9
COPAP53621 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
COPAP53621 AL359736.2-201ENST00000621992 437 ntBASIC20.67■□□□□ 0.9
COPAP53621 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COPAP53621 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.67■□□□□ 0.9
COPAP53621 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COPAP53621 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
COPAP53621 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
COPAP53621 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
COPAP53621 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COPAP53621 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
COPAP53621 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms