Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NUBP1P53384 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.16■□□□□ 0.82
NUBP1P53384 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NUBP1P53384 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.16■□□□□ 0.82
NUBP1P53384 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUBP1P53384 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUBP1P53384 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.16■□□□□ 0.82
NUBP1P53384 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.16■□□□□ 0.82
NUBP1P53384 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
NUBP1P53384 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUBP1P53384 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.16■□□□□ 0.82
NUBP1P53384 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.16■□□□□ 0.82
NUBP1P53384 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.16■□□□□ 0.82
NUBP1P53384 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUBP1P53384 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NUBP1P53384 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NUBP1P53384 AC068473.5-201ENST00000616428 2072 ntBASIC20.15■□□□□ 0.82
NUBP1P53384 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.15■□□□□ 0.82
NUBP1P53384 AC097488.1-201ENST00000507834 756 ntBASIC20.15■□□□□ 0.82
NUBP1P53384 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.15■□□□□ 0.82
NUBP1P53384 AC069148.1-201ENST00000608741 768 ntBASIC20.15■□□□□ 0.82
NUBP1P53384 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC20.15■□□□□ 0.82
NUBP1P53384 AC116562.4-202ENST00000641738 218 ntBASIC20.15■□□□□ 0.82
NUBP1P53384 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.15■□□□□ 0.82
NUBP1P53384 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUBP1P53384 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NUBP1P53384 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.15■□□□□ 0.82
NUBP1P53384 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NUBP1P53384 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NUBP1P53384 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NUBP1P53384 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.14■□□□□ 0.81
NUBP1P53384 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUBP1P53384 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.14■□□□□ 0.81
NUBP1P53384 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.14■□□□□ 0.81
NUBP1P53384 AC010740.1-201ENST00000417035 684 ntBASIC20.14■□□□□ 0.81
NUBP1P53384 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.14■□□□□ 0.81
NUBP1P53384 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NUBP1P53384 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.14■□□□□ 0.81
NUBP1P53384 HMGB3P14-201ENST00000494195 599 ntBASIC20.14■□□□□ 0.81
NUBP1P53384 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
NUBP1P53384 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.14■□□□□ 0.81
NUBP1P53384 AC116407.4-201ENST00000623319 1061 ntBASIC20.14■□□□□ 0.81
NUBP1P53384 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NUBP1P53384 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUBP1P53384 SEC63P1-201ENST00000425785 1258 ntBASIC20.13■□□□□ 0.81
NUBP1P53384 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.13■□□□□ 0.81
NUBP1P53384 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
NUBP1P53384 B3GAT3P1-201ENST00000471720 806 ntBASIC20.13■□□□□ 0.81
NUBP1P53384 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.13■□□□□ 0.81
NUBP1P53384 AL512604.3-201ENST00000569583 964 ntBASIC20.13■□□□□ 0.81
NUBP1P53384 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC20.13■□□□□ 0.81
NUBP1P53384 AC010653.2-201ENST00000623505 997 ntBASIC20.13■□□□□ 0.81
NUBP1P53384 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NUBP1P53384 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NUBP1P53384 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.13■□□□□ 0.81
NUBP1P53384 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
NUBP1P53384 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NUBP1P53384 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NUBP1P53384 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 AC124283.5-201ENST00000624661 1809 ntBASIC20.12■□□□□ 0.81
NUBP1P53384 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
NUBP1P53384 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 CCR12P-201ENST00000446203 998 ntBASIC20.12■□□□□ 0.81
NUBP1P53384 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.12■□□□□ 0.81
NUBP1P53384 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.12■□□□□ 0.81
NUBP1P53384 AC006518.1-201ENST00000541449 943 ntBASIC20.12■□□□□ 0.81
NUBP1P53384 AC103798.2-201ENST00000624292 632 ntBASIC20.12■□□□□ 0.81
NUBP1P53384 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.12■□□□□ 0.81
NUBP1P53384 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NUBP1P53384 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
NUBP1P53384 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NUBP1P53384 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.11■□□□□ 0.81
NUBP1P53384 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.11■□□□□ 0.81
NUBP1P53384 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUBP1P53384 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NUBP1P53384 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NUBP1P53384 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NUBP1P53384 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUBP1P53384 SSR1P1-201ENST00000407630 814 ntBASIC20.11■□□□□ 0.81
NUBP1P53384 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.11■□□□□ 0.81
NUBP1P53384 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUBP1P53384 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.11■□□□□ 0.81
NUBP1P53384 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.11■□□□□ 0.81
NUBP1P53384 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUBP1P53384 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUBP1P53384 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NUBP1P53384 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NUBP1P53384 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUBP1P53384 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NUBP1P53384 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUBP1P53384 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NUBP1P53384 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.1■□□□□ 0.81
NUBP1P53384 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms