Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 YDR426CYDR426C 378 nt1.79□□□□□ -2.12
VPS4P52917 YNL146WYNL146W 303 nt1.79□□□□□ -2.12
VPS4P52917 SPC110YDR356W 2835 nt1.79□□□□□ -2.12
VPS4P52917 INP2YMR163C 2118 nt1.78□□□□□ -2.12
VPS4P52917 YDR169C-AYDR169C-A 150 nt1.78□□□□□ -2.12
VPS4P52917 YER097WYER097W 330 nt1.78□□□□□ -2.12
VPS4P52917 YFL032WYFL032W 321 nt1.78□□□□□ -2.12
VPS4P52917 YJL135WYJL135W 318 nt1.78□□□□□ -2.12
VPS4P52917 PCC1YKR095W-A 267 nt1.78□□□□□ -2.12
VPS4P52917 TAR1YLR154W-C 375 nt1.78□□□□□ -2.12
VPS4P52917 FYV8YGR196C 2454 nt1.77□□□□□ -2.13
VPS4P52917 POL5YEL055C 3069 nt1.77□□□□□ -2.13
VPS4P52917 snR72snR72 98 nt1.77□□□□□ -2.13
VPS4P52917 YPR002C-AYPR002C-A 198 nt1.77□□□□□ -2.13
VPS4P52917 BRR2YER172C 6492 nt1.77□□□□□ -2.13
VPS4P52917 APL2YKL135C 2181 nt1.76□□□□□ -2.13
VPS4P52917 SAS3YBL052C 2496 nt1.76□□□□□ -2.13
VPS4P52917 PET127YOR017W 2403 nt1.76□□□□□ -2.13
VPS4P52917 IRA1YBR140C 9279 nt1.75□□□□□ -2.13
VPS4P52917 DGR2YKL121W 2559 nt1.75□□□□□ -2.13
VPS4P52917 NPC2YDL046W 522 nt1.75□□□□□ -2.13
VPS4P52917 YDR048CYDR048C 315 nt1.75□□□□□ -2.13
VPS4P52917 YDR183C-AYDR183C-A 258 nt1.75□□□□□ -2.13
VPS4P52917 YOR199WYOR199W 330 nt1.75□□□□□ -2.13
VPS4P52917 ENV11YGR071C 2583 nt1.74□□□□□ -2.13
VPS4P52917 MON2YNL297C 4911 nt1.74□□□□□ -2.13
VPS4P52917 PAU2YEL049W 363 nt1.74□□□□□ -2.13
VPS4P52917 PAU12YGR294W 363 nt1.74□□□□□ -2.13
VPS4P52917 YIL102CYIL102C 306 nt1.74□□□□□ -2.13
VPS4P52917 PAU24YBR301W 363 nt1.74□□□□□ -2.13
VPS4P52917 PIP2YOR363C 2991 nt1.74□□□□□ -2.13
VPS4P52917 YAR029WYAR029W 225 nt1.73□□□□□ -2.13
VPS4P52917 PIG1YLR273C 1947 nt1.73□□□□□ -2.13
VPS4P52917 SXM1YDR395W 2835 nt1.73□□□□□ -2.13
VPS4P52917 VPS15YBR097W 4365 nt1.73□□□□□ -2.13
VPS4P52917 TBS1YBR150C 3285 nt1.72□□□□□ -2.13
VPS4P52917 MAM33YIL070C 801 nt1.72□□□□□ -2.13
VPS4P52917 RPL31AYDL075W 342 nt1.71□□□□□ -2.14
VPS4P52917 YDR182W-AYDR182W-A 204 nt1.71□□□□□ -2.14
VPS4P52917 YMR031W-AYMR031W-A 327 nt1.71□□□□□ -2.14
VPS4P52917 YMR242W-AYMR242W-A 90 nt1.71□□□□□ -2.14
VPS4P52917 AI5_ALPHAQ0070 1893 nt1.71□□□□□ -2.14
VPS4P52917 ZIP2YGL249W 2115 nt1.7□□□□□ -2.14
VPS4P52917 tQ(UUG)E2tQ(UUG)E2 72 nt1.7□□□□□ -2.14
VPS4P52917 RPL39YJL189W 156 nt1.7□□□□□ -2.14
VPS4P52917 YMR230W-AYMR230W-A 189 nt1.7□□□□□ -2.14
VPS4P52917 YOL160WYOL160W 342 nt1.7□□□□□ -2.14
VPS4P52917 STE5YDR103W 2754 nt1.69□□□□□ -2.14
VPS4P52917 YFL063WYFL063W 456 nt1.69□□□□□ -2.14
VPS4P52917 TTI1YKL033W 3117 nt1.69□□□□□ -2.14
VPS4P52917 YOR019WYOR019W 2193 nt1.69□□□□□ -2.14
VPS4P52917 SKI3YPR189W 4299 nt1.69□□□□□ -2.14
VPS4P52917 SDH2YLL041C 801 nt1.68□□□□□ -2.14
VPS4P52917 YOR108C-AYOR108C-A 210 nt1.68□□□□□ -2.14
VPS4P52917 MSH3YCR092C 3057 nt1.68□□□□□ -2.14
VPS4P52917 YGL149WYGL149W 306 nt1.67□□□□□ -2.14
VPS4P52917 YLR422WYLR422W 5799 nt1.66□□□□□ -2.14
VPS4P52917 FIG2YCR089W 4830 nt1.66□□□□□ -2.14
VPS4P52917 HTL1YCR020W-B 237 nt1.66□□□□□ -2.14
VPS4P52917 EMC5YIL027C 426 nt1.66□□□□□ -2.14
VPS4P52917 YMR175W-AYMR175W-A 195 nt1.66□□□□□ -2.14
VPS4P52917 DBP6YNR038W 1890 nt1.66□□□□□ -2.14
VPS4P52917 CCH1YGR217W 6120 nt1.65□□□□□ -2.14
VPS4P52917 YNL277W-AYNL277W-A 189 nt1.65□□□□□ -2.15
VPS4P52917 NIP100YPL174C 2607 nt1.65□□□□□ -2.15
VPS4P52917 RAD50YNL250W 3939 nt1.64□□□□□ -2.15
VPS4P52917 YMR193C-AYMR193C-A 387 nt1.64□□□□□ -2.15
VPS4P52917 SPO24YPR036W-A 204 nt1.64□□□□□ -2.15
VPS4P52917 SEC5YDR166C 2916 nt1.64□□□□□ -2.15
VPS4P52917 MAD1YGL086W 2250 nt1.64□□□□□ -2.15
VPS4P52917 SPC98YNL126W 2541 nt1.64□□□□□ -2.15
VPS4P52917 NOC3YLR002C 1992 nt1.63□□□□□ -2.15
VPS4P52917 tH(GUG)E1tH(GUG)E1 72 nt1.63□□□□□ -2.15
VPS4P52917 tH(GUG)E2tH(GUG)E2 72 nt1.63□□□□□ -2.15
VPS4P52917 tH(GUG)G1tH(GUG)G1 72 nt1.63□□□□□ -2.15
VPS4P52917 tH(GUG)G2tH(GUG)G2 72 nt1.63□□□□□ -2.15
VPS4P52917 tH(GUG)HtH(GUG)H 72 nt1.63□□□□□ -2.15
VPS4P52917 tH(GUG)KtH(GUG)K 72 nt1.63□□□□□ -2.15
VPS4P52917 tH(GUG)MtH(GUG)M 72 nt1.63□□□□□ -2.15
VPS4P52917 YJL022WYJL022W 309 nt1.63□□□□□ -2.15
VPS4P52917 SMC4YLR086W 4257 nt1.63□□□□□ -2.15
VPS4P52917 PIK1YNL267W 3201 nt1.62□□□□□ -2.15
VPS4P52917 HKR1YDR420W 5409 nt1.62□□□□□ -2.15
VPS4P52917 RAD34YDR314C 2079 nt1.62□□□□□ -2.15
VPS4P52917 COF1YLL050C 432 nt1.62□□□□□ -2.15
VPS4P52917 YPR063CYPR063C 423 nt1.62□□□□□ -2.15
VPS4P52917 OST1YJL002C 1431 nt1.62□□□□□ -2.15
VPS4P52917 UFD2YDL190C 2886 nt1.62□□□□□ -2.15
VPS4P52917 YDL211CYDL211C 1119 nt1.61□□□□□ -2.15
VPS4P52917 YMR290W-AYMR290W-A 348 nt1.61□□□□□ -2.15
VPS4P52917 KCS1YDR017C 3153 nt1.61□□□□□ -2.15
VPS4P52917 SCW11YGL028C 1629 nt1.6□□□□□ -2.15
VPS4P52917 snR65snR65 100 nt1.6□□□□□ -2.15
VPS4P52917 YGL217CYGL217C 342 nt1.6□□□□□ -2.15
VPS4P52917 YIL032CYIL032C 357 nt1.6□□□□□ -2.15
VPS4P52917 YOR376WYOR376W 369 nt1.6□□□□□ -2.15
VPS4P52917 ALK1YGL021W 2283 nt1.6□□□□□ -2.15
VPS4P52917 LAA1YJL207C 6045 nt1.59□□□□□ -2.16
VPS4P52917 MPT5YGL178W 2580 nt1.58□□□□□ -2.16
VPS4P52917 AHC1YOR023C 1701 nt1.58□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 33.4 ms