Protein–RNA interactions for Protein: P51534

SHE4, SWI5-dependent HO expression protein 4, yeastyeast

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHE4P51534 APL1YJR005W 2103 nt1.22□□□□□ -2.21
SHE4P51534 PXA2YKL188C 2562 nt1.22□□□□□ -2.21
SHE4P51534 NUP188YML103C 4968 nt1.22□□□□□ -2.21
SHE4P51534 SWI4YER111C 3282 nt1.22□□□□□ -2.21
SHE4P51534 HIT1YJR055W 495 nt1.22□□□□□ -2.21
SHE4P51534 ISF1YMR081C 1017 nt1.22□□□□□ -2.21
SHE4P51534 RPL33BYOR234C 324 nt1.22□□□□□ -2.21
SHE4P51534 YPR012WYPR012W 255 nt1.22□□□□□ -2.21
SHE4P51534 VAM6YDL077C 3150 nt1.22□□□□□ -2.21
SHE4P51534 AIM44YPL158C 2277 nt1.22□□□□□ -2.21
SHE4P51534 NUT1YGL151W 3399 nt1.21□□□□□ -2.22
SHE4P51534 SAS3YBL052C 2496 nt1.21□□□□□ -2.22
SHE4P51534 HMRA1YCR097W 381 nt1.21□□□□□ -2.22
SHE4P51534 tH(GUG)E1tH(GUG)E1 72 nt1.21□□□□□ -2.22
SHE4P51534 tH(GUG)E2tH(GUG)E2 72 nt1.21□□□□□ -2.22
SHE4P51534 tH(GUG)G1tH(GUG)G1 72 nt1.21□□□□□ -2.22
SHE4P51534 tH(GUG)G2tH(GUG)G2 72 nt1.21□□□□□ -2.22
SHE4P51534 tH(GUG)HtH(GUG)H 72 nt1.21□□□□□ -2.22
SHE4P51534 tH(GUG)KtH(GUG)K 72 nt1.21□□□□□ -2.22
SHE4P51534 tH(GUG)MtH(GUG)M 72 nt1.21□□□□□ -2.22
SHE4P51534 YLR334CYLR334C 381 nt1.21□□□□□ -2.22
SHE4P51534 PIP2YOR363C 2991 nt1.21□□□□□ -2.22
SHE4P51534 SPT21YMR179W 2277 nt1.2□□□□□ -2.22
SHE4P51534 SLY1YDR189W 2001 nt1.2□□□□□ -2.22
SHE4P51534 RTR1YER139C 681 nt1.2□□□□□ -2.22
SHE4P51534 RPL34BYIL052C 366 nt1.2□□□□□ -2.22
SHE4P51534 RPS27AYKL156W 249 nt1.2□□□□□ -2.22
SHE4P51534 YOR121CYOR121C 306 nt1.2□□□□□ -2.22
SHE4P51534 YPL261CYPL261C 309 nt1.2□□□□□ -2.22
SHE4P51534 YHL041WYHL041W 450 nt1.19□□□□□ -2.22
SHE4P51534 YIL059CYIL059C 366 nt1.19□□□□□ -2.22
SHE4P51534 YKL083WYKL083W 615 nt1.19□□□□□ -2.22
SHE4P51534 SDH2YLL041C 801 nt1.19□□□□□ -2.22
SHE4P51534 AI5_ALPHAQ0070 1893 nt1.18□□□□□ -2.22
SHE4P51534 RFX1YLR176C 2436 nt1.18□□□□□ -2.22
SHE4P51534 CYC7YEL039C 342 nt1.18□□□□□ -2.22
SHE4P51534 YML003WYML003W 873 nt1.18□□□□□ -2.22
SHE4P51534 YMR141W-AYMR141W-A 225 nt1.18□□□□□ -2.22
SHE4P51534 MPT5YGL178W 2580 nt1.18□□□□□ -2.22
SHE4P51534 NST1YNL091W 3723 nt1.18□□□□□ -2.22
SHE4P51534 NUP145YGL092W 3954 nt1.18□□□□□ -2.22
SHE4P51534 AIM9YER080W 1884 nt1.18□□□□□ -2.22
SHE4P51534 YGR130CYGR130C 2451 nt1.17□□□□□ -2.22
SHE4P51534 YMR175W-AYMR175W-A 195 nt1.17□□□□□ -2.22
SHE4P51534 NUT2YPR168W 474 nt1.17□□□□□ -2.22
SHE4P51534 YLL032CYLL032C 2478 nt1.16□□□□□ -2.22
SHE4P51534 MDS3YGL197W 4464 nt1.16□□□□□ -2.22
SHE4P51534 snR56snR56 88 nt1.16□□□□□ -2.22
SHE4P51534 YPL229WYPL229W 621 nt1.16□□□□□ -2.22
SHE4P51534 SCW11YGL028C 1629 nt1.15□□□□□ -2.22
SHE4P51534 EFR3YMR212C 2349 nt1.15□□□□□ -2.23
SHE4P51534 YJR029WYJR029W 5268 nt1.15□□□□□ -2.23
SHE4P51534 YPR137C-BYPR137C-B 5268 nt1.15□□□□□ -2.23
SHE4P51534 snR14snR14 160 nt1.15□□□□□ -2.23
SHE4P51534 PAC1YOR269W 1485 nt1.15□□□□□ -2.23
SHE4P51534 GIM4YEL003W 336 nt1.14□□□□□ -2.23
SHE4P51534 YGR174W-AYGR174W-A 87 nt1.14□□□□□ -2.23
SHE4P51534 UPS1YLR193C 528 nt1.14□□□□□ -2.23
SHE4P51534 IML1YJR138W 4755 nt1.13□□□□□ -2.23
SHE4P51534 YHR175W-AYHR175W-A 150 nt1.13□□□□□ -2.23
SHE4P51534 tV(UAC)BtV(UAC)B 74 nt1.13□□□□□ -2.23
SHE4P51534 tV(UAC)DtV(UAC)D 74 nt1.13□□□□□ -2.23
SHE4P51534 MRPL31YKL138C 396 nt1.13□□□□□ -2.23
SHE4P51534 IRC23YOR044W 474 nt1.13□□□□□ -2.23
SHE4P51534 YBR012CYBR012C 420 nt1.13□□□□□ -2.23
SHE4P51534 SPO75YLL005C 2607 nt1.13□□□□□ -2.23
SHE4P51534 APL2YKL135C 2181 nt1.13□□□□□ -2.23
SHE4P51534 APL3YBL037W 3078 nt1.12□□□□□ -2.23
SHE4P51534 EAF1YDR359C 2949 nt1.12□□□□□ -2.23
SHE4P51534 tW(UCA)QtW(UCA)Q 74 nt1.12□□□□□ -2.23
SHE4P51534 YJR003CYJR003C 1560 nt1.12□□□□□ -2.23
SHE4P51534 ATP6Q0085 780 nt1.11□□□□□ -2.23
SHE4P51534 tR(ACG)Q2tR(ACG)Q2 74 nt1.11□□□□□ -2.23
SHE4P51534 YAR053WYAR053W 297 nt1.11□□□□□ -2.23
SHE4P51534 YOR072W-AYOR072W-A 249 nt1.11□□□□□ -2.23
SHE4P51534 ENV11YGR071C 2583 nt1.11□□□□□ -2.23
SHE4P51534 YDR182W-AYDR182W-A 204 nt1.1□□□□□ -2.23
SHE4P51534 YGR035CYGR035C 351 nt1.1□□□□□ -2.23
SHE4P51534 YOR029WYOR029W 336 nt1.1□□□□□ -2.23
SHE4P51534 YPR016W-AYPR016W-A 261 nt1.1□□□□□ -2.23
SHE4P51534 STB6YKL072W 2301 nt1.09□□□□□ -2.23
SHE4P51534 YDR169C-AYDR169C-A 150 nt1.09□□□□□ -2.23
SHE4P51534 CSN9YDR179C 489 nt1.09□□□□□ -2.23
SHE4P51534 snR51snR51 107 nt1.09□□□□□ -2.23
SHE4P51534 TTI1YKL033W 3117 nt1.09□□□□□ -2.24
SHE4P51534 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
SHE4P51534 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
SHE4P51534 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
SHE4P51534 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
SHE4P51534 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
SHE4P51534 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
SHE4P51534 YBR200W-AYBR200W-A 165 nt1.08□□□□□ -2.24
SHE4P51534 SCC2YDR180W 4482 nt1.08□□□□□ -2.24
SHE4P51534 MMS4YBR098W 2076 nt1.08□□□□□ -2.24
SHE4P51534 SPT7YBR081C 3999 nt1.07□□□□□ -2.24
SHE4P51534 FIG4YNL325C 2640 nt1.07□□□□□ -2.24
SHE4P51534 YJL135WYJL135W 318 nt1.07□□□□□ -2.24
SHE4P51534 LCD1YDR499W 2244 nt1.06□□□□□ -2.24
SHE4P51534 snR72snR72 98 nt1.06□□□□□ -2.24
SHE4P51534 RPS20YHL015W 366 nt1.06□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 27.4 ms