Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PRIM2P49643 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
PRIM2P49643 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.1■□□□□ 0.65
PRIM2P49643 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
PRIM2P49643 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PRIM2P49643 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PRIM2P49643 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.09■□□□□ 0.65
PRIM2P49643 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.09■□□□□ 0.65
PRIM2P49643 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PRIM2P49643 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.09■□□□□ 0.65
PRIM2P49643 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.09■□□□□ 0.65
PRIM2P49643 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PRIM2P49643 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.09■□□□□ 0.65
PRIM2P49643 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PRIM2P49643 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PRIM2P49643 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.08■□□□□ 0.65
PRIM2P49643 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PRIM2P49643 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.08■□□□□ 0.65
PRIM2P49643 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PRIM2P49643 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.08■□□□□ 0.64
PRIM2P49643 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.08■□□□□ 0.64
PRIM2P49643 FAM21FP-204ENST00000608637 956 ntBASIC19.08■□□□□ 0.64
PRIM2P49643 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.08■□□□□ 0.64
PRIM2P49643 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.08■□□□□ 0.64
PRIM2P49643 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PRIM2P49643 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PRIM2P49643 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.08■□□□□ 0.64
PRIM2P49643 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PRIM2P49643 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRIM2P49643 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.07■□□□□ 0.64
PRIM2P49643 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.07■□□□□ 0.64
PRIM2P49643 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRIM2P49643 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRIM2P49643 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.07■□□□□ 0.64
PRIM2P49643 AL591742.1-201ENST00000604433 565 ntBASIC19.07■□□□□ 0.64
PRIM2P49643 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.07■□□□□ 0.64
PRIM2P49643 AC013268.1-206ENST00000638368 961 ntBASIC19.07■□□□□ 0.64
PRIM2P49643 AC112229.1-201ENST00000639295 961 ntBASIC19.07■□□□□ 0.64
PRIM2P49643 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
PRIM2P49643 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
PRIM2P49643 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRIM2P49643 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.07■□□□□ 0.64
PRIM2P49643 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.06■□□□□ 0.64
PRIM2P49643 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRIM2P49643 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRIM2P49643 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PRIM2P49643 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRIM2P49643 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.06■□□□□ 0.64
PRIM2P49643 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
PRIM2P49643 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.06■□□□□ 0.64
PRIM2P49643 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.06■□□□□ 0.64
PRIM2P49643 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.06■□□□□ 0.64
PRIM2P49643 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.06■□□□□ 0.64
PRIM2P49643 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PRIM2P49643 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRIM2P49643 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRIM2P49643 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRIM2P49643 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PRIM2P49643 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRIM2P49643 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRIM2P49643 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRIM2P49643 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRIM2P49643 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.05■□□□□ 0.64
PRIM2P49643 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRIM2P49643 AC007322.4-201ENST00000509611 723 ntBASIC19.05■□□□□ 0.64
PRIM2P49643 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms