Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 YIL156W-BYIL156W-B 222 nt2.64□□□□□ -1.99
VPS53P47061 KTI11YBL071W-A 249 nt2.64□□□□□ -1.99
VPS53P47061 RPL33BYOR234C 324 nt2.64□□□□□ -1.99
VPS53P47061 ARP8YOR141C 2646 nt2.64□□□□□ -1.99
VPS53P47061 PUT3YKL015W 2940 nt2.64□□□□□ -1.99
VPS53P47061 VPS13YLL040C 9435 nt2.64□□□□□ -1.99
VPS53P47061 YNL018CYNL018C 1839 nt2.63□□□□□ -1.99
VPS53P47061 HYP2YEL034W 474 nt2.63□□□□□ -1.99
VPS53P47061 EMP24YGL200C 612 nt2.63□□□□□ -1.99
VPS53P47061 YBR174CYBR174C 315 nt2.63□□□□□ -1.99
VPS53P47061 MNE1YOR350C 1992 nt2.63□□□□□ -1.99
VPS53P47061 IRA2YOL081W 9240 nt2.62□□□□□ -1.99
VPS53P47061 ZRG8YER033C 3231 nt2.62□□□□□ -1.99
VPS53P47061 PSD2YGR170W 3417 nt2.62□□□□□ -1.99
VPS53P47061 PRP42YDR235W 1635 nt2.62□□□□□ -1.99
VPS53P47061 ACM1YPL267W 630 nt2.62□□□□□ -1.99
VPS53P47061 YCL046WYCL046W 324 nt2.62□□□□□ -1.99
VPS53P47061 ORC2YBR060C 1863 nt2.62□□□□□ -1.99
VPS53P47061 PHO91YNR013C 2685 nt2.61□□□□□ -1.99
VPS53P47061 TRS130YMR218C 3309 nt2.61□□□□□ -1.99
VPS53P47061 KRE33YNL132W 3171 nt2.61□□□□□ -1.99
VPS53P47061 YJL120WYJL120W 324 nt2.61□□□□□ -1.99
VPS53P47061 YLR154W-AYLR154W-A 186 nt2.61□□□□□ -1.99
VPS53P47061 ATG11YPR049C 3537 nt2.61□□□□□ -1.99
VPS53P47061 SPF1YEL031W 3648 nt2.61□□□□□ -1.99
VPS53P47061 MSC6YOR354C 2079 nt2.61□□□□□ -1.99
VPS53P47061 YEL073CYEL073C 324 nt2.6□□□□□ -1.99
VPS53P47061 SGM1YJR134C 2124 nt2.59□□□□□ -1.99
VPS53P47061 RPL34BYIL052C 366 nt2.59□□□□□ -1.99
VPS53P47061 YOR072W-BYOR072W-B 162 nt2.59□□□□□ -1.99
VPS53P47061 SMC6YLR383W 3345 nt2.58□□□□□ -2
VPS53P47061 MSB1YOR188W 3414 nt2.58□□□□□ -2
VPS53P47061 ELG1YOR144C 2376 nt2.58□□□□□ -2
VPS53P47061 YDR003W-AYDR003W-A 123 nt2.58□□□□□ -2
VPS53P47061 YIR044CYIR044C 186 nt2.58□□□□□ -2
VPS53P47061 ATP7YKL016C 525 nt2.58□□□□□ -2
VPS53P47061 RPS25BYLR333C 327 nt2.58□□□□□ -2
VPS53P47061 SVL3YPL032C 2478 nt2.57□□□□□ -2
VPS53P47061 SCD5YOR329C 2619 nt2.56□□□□□ -2
VPS53P47061 YBR178WYBR178W 375 nt2.56□□□□□ -2
VPS53P47061 COY1YKL179C 2040 nt2.56□□□□□ -2
VPS53P47061 NUP100YKL068W 2880 nt2.55□□□□□ -2
VPS53P47061 RLM1YPL089C 2031 nt2.55□□□□□ -2
VPS53P47061 CAT2YML042W 2013 nt2.54□□□□□ -2
VPS53P47061 ZRG17YNR039C 1818 nt2.54□□□□□ -2
VPS53P47061 TRA1YHR099W 11235 nt2.54□□□□□ -2
VPS53P47061 SIR3YLR442C 2937 nt2.54□□□□□ -2
VPS53P47061 YLL007CYLL007C 1998 nt2.53□□□□□ -2
VPS53P47061 PAU3YCR104W 375 nt2.53□□□□□ -2
VPS53P47061 SNU13YEL026W 381 nt2.53□□□□□ -2
VPS53P47061 YHR210CYHR210C 1026 nt2.53□□□□□ -2
VPS53P47061 YOL098CYOL098C 3114 nt2.53□□□□□ -2
VPS53P47061 TFC8YPL007C 1767 nt2.53□□□□□ -2
VPS53P47061 BNI1YNL271C 5862 nt2.53□□□□□ -2
VPS53P47061 NAM7YMR080C 2916 nt2.52□□□□□ -2.01
VPS53P47061 YDL196WYDL196W 330 nt2.52□□□□□ -2.01
VPS53P47061 YLL019W-AYLL019W-A 93 nt2.52□□□□□ -2.01
VPS53P47061 YMR242W-AYMR242W-A 90 nt2.52□□□□□ -2.01
VPS53P47061 HSH155YMR288W 2916 nt2.52□□□□□ -2.01
VPS53P47061 RAD34YDR314C 2079 nt2.52□□□□□ -2.01
VPS53P47061 SAP190YKR028W 3102 nt2.52□□□□□ -2.01
VPS53P47061 NOC3YLR002C 1992 nt2.51□□□□□ -2.01
VPS53P47061 UBR1YGR184C 5853 nt2.51□□□□□ -2.01
VPS53P47061 RPL31AYDL075W 342 nt2.51□□□□□ -2.01
VPS53P47061 EDS1YBR033W 2760 nt2.51□□□□□ -2.01
VPS53P47061 NOP14YDL148C 2433 nt2.51□□□□□ -2.01
VPS53P47061 MMS22YLR320W 4365 nt2.51□□□□□ -2.01
VPS53P47061 ZIP2YGL249W 2115 nt2.5□□□□□ -2.01
VPS53P47061 ENV11YGR071C 2583 nt2.5□□□□□ -2.01
VPS53P47061 SEC16YPL085W 6588 nt2.5□□□□□ -2.01
VPS53P47061 TUS1YLR425W 3924 nt2.49□□□□□ -2.01
VPS53P47061 NCA2YPR155C 1851 nt2.49□□□□□ -2.01
VPS53P47061 YDR524C-AYDR524C-A 120 nt2.48□□□□□ -2.01
VPS53P47061 HAL9YOL089C 3093 nt2.48□□□□□ -2.01
VPS53P47061 SIR4YDR227W 4077 nt2.47□□□□□ -2.01
VPS53P47061 YCR102W-AYCR102W-A 198 nt2.47□□□□□ -2.01
VPS53P47061 YOR329W-AYOR329W-A 210 nt2.47□□□□□ -2.01
VPS53P47061 YEF3YLR249W 3135 nt2.47□□□□□ -2.01
VPS53P47061 ZIP1YDR285W 2628 nt2.47□□□□□ -2.01
VPS53P47061 FIG4YNL325C 2640 nt2.47□□□□□ -2.01
VPS53P47061 MET18YIL128W 3099 nt2.47□□□□□ -2.01
VPS53P47061 AHC1YOR023C 1701 nt2.46□□□□□ -2.02
VPS53P47061 MAD1YGL086W 2250 nt2.46□□□□□ -2.02
VPS53P47061 RPS17AYML024W 411 nt2.46□□□□□ -2.02
VPS53P47061 SAS3YBL052C 2496 nt2.45□□□□□ -2.02
VPS53P47061 BRP1YGL007W 378 nt2.45□□□□□ -2.02
VPS53P47061 VPS8YAL002W 3825 nt2.45□□□□□ -2.02
VPS53P47061 YOR108C-AYOR108C-A 210 nt2.45□□□□□ -2.02
VPS53P47061 IRC8YJL051W 2469 nt2.44□□□□□ -2.02
VPS53P47061 YPR097WYPR097W 3222 nt2.44□□□□□ -2.02
VPS53P47061 DNF1YER166W 4716 nt2.44□□□□□ -2.02
VPS53P47061 APL2YKL135C 2181 nt2.43□□□□□ -2.02
VPS53P47061 AIM44YPL158C 2277 nt2.43□□□□□ -2.02
VPS53P47061 TIM9YEL020W-A 264 nt2.43□□□□□ -2.02
VPS53P47061 SSD1YDR293C 3753 nt2.43□□□□□ -2.02
VPS53P47061 CSF1YLR087C 8877 nt2.42□□□□□ -2.02
VPS53P47061 UTP22YGR090W 3714 nt2.42□□□□□ -2.02
VPS53P47061 YBL109WYBL109W 336 nt2.42□□□□□ -2.02
VPS53P47061 PIP2YOR363C 2991 nt2.41□□□□□ -2.02
VPS53P47061 DCP2YNL118C 2913 nt2.41□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 55.7 ms