Protein–RNA interactions for Protein: P46678

BDP1, Transcription factor TFIIIB component B'', yeastyeast

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDP1P46678 SSN2YDR443C 4263 nt3.25□□□□□ -1.89
BDP1P46678 KAP123YER110C 3342 nt3.25□□□□□ -1.89
BDP1P46678 YIL002W-AYIL002W-A 210 nt3.24□□□□□ -1.89
BDP1P46678 SUL1YBR294W 2580 nt3.24□□□□□ -1.89
BDP1P46678 YLL054CYLL054C 2532 nt3.24□□□□□ -1.89
BDP1P46678 RTT10YPL183C 3042 nt3.23□□□□□ -1.89
BDP1P46678 YDR034C-AYDR034C-A 177 nt3.23□□□□□ -1.89
BDP1P46678 HRD3YLR207W 2502 nt3.23□□□□□ -1.89
BDP1P46678 SLH1YGR271W 5904 nt3.23□□□□□ -1.89
BDP1P46678 MNL2YLR057W 2550 nt3.22□□□□□ -1.89
BDP1P46678 YGL182CYGL182C 324 nt3.22□□□□□ -1.89
BDP1P46678 YKR075W-AYKR075W-A 270 nt3.22□□□□□ -1.89
BDP1P46678 RRP12YPL012W 3687 nt3.22□□□□□ -1.89
BDP1P46678 YPL150WYPL150W 2706 nt3.22□□□□□ -1.89
BDP1P46678 RRP6YOR001W 2202 nt3.21□□□□□ -1.89
BDP1P46678 NAM7YMR080C 2916 nt3.21□□□□□ -1.9
BDP1P46678 RPS22AYJL190C 393 nt3.21□□□□□ -1.9
BDP1P46678 YMR242W-AYMR242W-A 90 nt3.21□□□□□ -1.9
BDP1P46678 YOR108C-AYOR108C-A 210 nt3.21□□□□□ -1.9
BDP1P46678 snR53snR53 91 nt3.21□□□□□ -1.9
BDP1P46678 PDR8YLR266C 2106 nt3.2□□□□□ -1.9
BDP1P46678 RGA2YDR379W 3030 nt3.2□□□□□ -1.9
BDP1P46678 NFT1YKR103W 3657 nt3.2□□□□□ -1.9
BDP1P46678 INP53YOR109W 3324 nt3.2□□□□□ -1.9
BDP1P46678 AXL1YPR122W 3627 nt3.2□□□□□ -1.9
BDP1P46678 YDR354C-AYDR354C-A 144 nt3.2□□□□□ -1.9
BDP1P46678 YIL082W-AYIL082W-A 4497 nt3.19□□□□□ -1.9
BDP1P46678 DUG2YBR281C 2637 nt3.19□□□□□ -1.9
BDP1P46678 PRP6YBR055C 2700 nt3.19□□□□□ -1.9
BDP1P46678 YLR035C-AYLR035C-A 3468 nt3.18□□□□□ -1.9
BDP1P46678 PTP2YOR208W 2253 nt3.18□□□□□ -1.9
BDP1P46678 ATG11YPR049C 3537 nt3.18□□□□□ -1.9
BDP1P46678 tW(CCA)G1tW(CCA)G1 72 nt3.18□□□□□ -1.9
BDP1P46678 tW(CCA)G2tW(CCA)G2 72 nt3.18□□□□□ -1.9
BDP1P46678 tW(CCA)JtW(CCA)J 72 nt3.18□□□□□ -1.9
BDP1P46678 tW(CCA)KtW(CCA)K 72 nt3.18□□□□□ -1.9
BDP1P46678 tW(CCA)MtW(CCA)M 72 nt3.18□□□□□ -1.9
BDP1P46678 tW(CCA)PtW(CCA)P 72 nt3.18□□□□□ -1.9
BDP1P46678 TTI1YKL033W 3117 nt3.17□□□□□ -1.9
BDP1P46678 IFH1YLR223C 3258 nt3.17□□□□□ -1.9
BDP1P46678 SIN3YOL004W 4611 nt3.17□□□□□ -1.9
BDP1P46678 YHR086W-AYHR086W-A 162 nt3.17□□□□□ -1.9
BDP1P46678 snR39BsnR39B 96 nt3.17□□□□□ -1.9
BDP1P46678 CRM1YGR218W 3255 nt3.17□□□□□ -1.9
BDP1P46678 TAE2YPL009C 3117 nt3.17□□□□□ -1.9
BDP1P46678 STB6YKL072W 2301 nt3.16□□□□□ -1.9
BDP1P46678 PRP8YHR165C 7242 nt3.16□□□□□ -1.9
BDP1P46678 STB4YMR019W 2850 nt3.16□□□□□ -1.9
BDP1P46678 GCV2YMR189W 3105 nt3.16□□□□□ -1.9
BDP1P46678 PAU8YAL068C 363 nt3.16□□□□□ -1.9
BDP1P46678 PAU18YLL064C 363 nt3.16□□□□□ -1.9
BDP1P46678 PAU6YNR076W 363 nt3.16□□□□□ -1.9
BDP1P46678 PAU20YOL161C 363 nt3.16□□□□□ -1.9
BDP1P46678 HMI1YOL095C 2121 nt3.16□□□□□ -1.9
BDP1P46678 ZRG8YER033C 3231 nt3.15□□□□□ -1.9
BDP1P46678 SAP1YER047C 2694 nt3.15□□□□□ -1.91
BDP1P46678 MMS22YLR320W 4365 nt3.15□□□□□ -1.91
BDP1P46678 DNL4YOR005C 2835 nt3.15□□□□□ -1.91
BDP1P46678 YJL026C-AYJL026C-A 222 nt3.15□□□□□ -1.91
BDP1P46678 MAD1YGL086W 2250 nt3.15□□□□□ -1.91
BDP1P46678 AFI1YOR129C 2682 nt3.14□□□□□ -1.91
BDP1P46678 CAT2YML042W 2013 nt3.14□□□□□ -1.91
BDP1P46678 FIR1YER032W 2631 nt3.13□□□□□ -1.91
BDP1P46678 PNC1YGL037C 651 nt3.13□□□□□ -1.91
BDP1P46678 CRS5YOR031W 210 nt3.13□□□□□ -1.91
BDP1P46678 COX5BYIL111W 456 nt3.12□□□□□ -1.91
BDP1P46678 SPO22YIL073C 2928 nt3.12□□□□□ -1.91
BDP1P46678 SAS3YBL052C 2496 nt3.12□□□□□ -1.91
BDP1P46678 YLL020CYLL020C 306 nt3.11□□□□□ -1.91
BDP1P46678 KTI11YBL071W-A 249 nt3.11□□□□□ -1.91
BDP1P46678 YOL083C-AYOL083C-A 141 nt3.11□□□□□ -1.91
BDP1P46678 YBR072C-AYBR072C-A 162 nt3.1□□□□□ -1.91
BDP1P46678 YDR186CYDR186C 2634 nt3.1□□□□□ -1.91
BDP1P46678 DGR2YKL121W 2559 nt3.09□□□□□ -1.91
BDP1P46678 LHS1YKL073W 2646 nt3.09□□□□□ -1.91
BDP1P46678 SRO77YBL106C 3033 nt3.09□□□□□ -1.91
BDP1P46678 FYV10YIL097W 1551 nt3.09□□□□□ -1.91
BDP1P46678 FKS3YMR306W 5358 nt3.09□□□□□ -1.91
BDP1P46678 BCK1YJL095W 4437 nt3.09□□□□□ -1.91
BDP1P46678 SLN1YIL147C 3663 nt3.08□□□□□ -1.92
BDP1P46678 YIL156W-BYIL156W-B 222 nt3.08□□□□□ -1.92
BDP1P46678 BNR1YIL159W 4128 nt3.08□□□□□ -1.92
BDP1P46678 YDR098C-BYDR098C-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YDR210C-DYDR210C-D 5268 nt3.08□□□□□ -1.92
BDP1P46678 YDR316W-BYDR316W-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YDR365W-BYDR365W-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YER138CYER138C 5268 nt3.08□□□□□ -1.92
BDP1P46678 YER160CYER160C 5268 nt3.08□□□□□ -1.92
BDP1P46678 YGR038C-BYGR038C-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YGR161C-DYGR161C-D 5268 nt3.08□□□□□ -1.92
BDP1P46678 YJR027WYJR027W 5268 nt3.08□□□□□ -1.92
BDP1P46678 YLR157C-BYLR157C-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YML039WYML039W 5268 nt3.08□□□□□ -1.92
BDP1P46678 YML045WYML045W 5268 nt3.08□□□□□ -1.92
BDP1P46678 YMR050CYMR050C 5268 nt3.08□□□□□ -1.92
BDP1P46678 YOL103W-BYOL103W-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YBR012W-BYBR012W-B 5271 nt3.08□□□□□ -1.92
BDP1P46678 YOR142W-BYOR142W-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YPL257W-BYPL257W-B 5268 nt3.08□□□□□ -1.92
BDP1P46678 YPR158W-BYPR158W-B 5271 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 28 ms