Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MDH1P40925 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MDH1P40925 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MDH1P40925 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
MDH1P40925 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MDH1P40925 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.21■□□□□ 0.83
MDH1P40925 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MDH1P40925 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.2■□□□□ 0.82
MDH1P40925 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MDH1P40925 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MDH1P40925 AP004607.4-201ENST00000530158 1459 ntBASIC20.2■□□□□ 0.82
MDH1P40925 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MDH1P40925 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.2■□□□□ 0.82
MDH1P40925 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MDH1P40925 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.2■□□□□ 0.82
MDH1P40925 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MDH1P40925 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
MDH1P40925 SYT6-210ENST00000641643 1587 ntBASIC20.2■□□□□ 0.82
MDH1P40925 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
MDH1P40925 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MDH1P40925 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
MDH1P40925 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MDH1P40925 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.2■□□□□ 0.82
MDH1P40925 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.19■□□□□ 0.82
MDH1P40925 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.19■□□□□ 0.82
MDH1P40925 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
MDH1P40925 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
MDH1P40925 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.19■□□□□ 0.82
MDH1P40925 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MDH1P40925 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.19■□□□□ 0.82
MDH1P40925 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 AL033527.3-201ENST00000566366 1196 ntBASIC20.19■□□□□ 0.82
MDH1P40925 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
MDH1P40925 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.19■□□□□ 0.82
MDH1P40925 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MDH1P40925 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
MDH1P40925 AC079598.2-202ENST00000546624 1451 ntBASIC20.18■□□□□ 0.82
MDH1P40925 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MDH1P40925 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MDH1P40925 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
MDH1P40925 TSPY9P-201ENST00000440215 945 ntBASIC20.18■□□□□ 0.82
MDH1P40925 TSPY11P-201ENST00000442607 1045 ntBASIC20.18■□□□□ 0.82
MDH1P40925 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.18■□□□□ 0.82
MDH1P40925 MIR6724-1-201ENST00000616420 92 ntBASIC20.18■□□□□ 0.82
MDH1P40925 MIR6724-2-201ENST00000616483 92 ntBASIC20.18■□□□□ 0.82
MDH1P40925 MIR6724-4-201ENST00000617390 92 ntBASIC20.18■□□□□ 0.82
MDH1P40925 MIR6724-3-201ENST00000622482 92 ntBASIC20.18■□□□□ 0.82
MDH1P40925 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MDH1P40925 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
MDH1P40925 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.18■□□□□ 0.82
MDH1P40925 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MDH1P40925 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
MDH1P40925 AC009237.3-201ENST00000393279 1427 ntBASIC20.18■□□□□ 0.82
MDH1P40925 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MDH1P40925 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MDH1P40925 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.18■□□□□ 0.82
MDH1P40925 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.18■□□□□ 0.82
MDH1P40925 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MDH1P40925 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.17■□□□□ 0.82
MDH1P40925 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
MDH1P40925 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MDH1P40925 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.17■□□□□ 0.82
MDH1P40925 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.17■□□□□ 0.82
MDH1P40925 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MDH1P40925 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.17■□□□□ 0.82
MDH1P40925 DPP3P2-201ENST00000416030 1696 ntBASIC20.17■□□□□ 0.82
MDH1P40925 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MDH1P40925 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MDH1P40925 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MDH1P40925 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MDH1P40925 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.17■□□□□ 0.82
MDH1P40925 CROCCP3-202ENST00000420820 1947 ntBASIC20.17■□□□□ 0.82
MDH1P40925 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MDH1P40925 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
MDH1P40925 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MDH1P40925 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
MDH1P40925 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MDH1P40925 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.16■□□□□ 0.82
MDH1P40925 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MDH1P40925 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
MDH1P40925 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
MDH1P40925 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.16■□□□□ 0.82
MDH1P40925 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.16■□□□□ 0.82
MDH1P40925 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.16■□□□□ 0.82
MDH1P40925 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MDH1P40925 LTB4R2-202ENST00000528054 3092 ntBASIC20.16■□□□□ 0.82
MDH1P40925 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms