Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 NNF2YGR089W 2811 nt4.05□□□□□ -1.76
YCK3P39962 VMA1YDL185W 3216 nt4.05□□□□□ -1.76
YCK3P39962 YLR278CYLR278C 4026 nt4.04□□□□□ -1.76
YCK3P39962 ENV11YGR071C 2583 nt4.04□□□□□ -1.76
YCK3P39962 APE2YKL157W 2859 nt4.04□□□□□ -1.76
YCK3P39962 BCK2YER167W 2556 nt4.03□□□□□ -1.76
YCK3P39962 VAS1YGR094W 3315 nt4.03□□□□□ -1.76
YCK3P39962 tV(UAC)QtV(UAC)Q 76 nt4.03□□□□□ -1.76
YCK3P39962 MRPL39YML009C 213 nt4.03□□□□□ -1.76
YCK3P39962 BUL2YML111W 2763 nt4.02□□□□□ -1.77
YCK3P39962 NUP157YER105C 4176 nt4.01□□□□□ -1.77
YCK3P39962 FMP46YKR049C 402 nt4□□□□□ -1.77
YCK3P39962 MGR2YPL098C 342 nt4□□□□□ -1.77
YCK3P39962 YPR170W-BYPR170W-B 258 nt4□□□□□ -1.77
YCK3P39962 PKH3YDR466W 2697 nt3.98□□□□□ -1.77
YCK3P39962 SPC105YGL093W 2754 nt3.97□□□□□ -1.77
YCK3P39962 ADR1YDR216W 3972 nt3.97□□□□□ -1.77
YCK3P39962 ATG11YPR049C 3537 nt3.96□□□□□ -1.77
YCK3P39962 TEL1YBL088C 8364 nt3.96□□□□□ -1.78
YCK3P39962 HFA1YMR207C 6372 nt3.95□□□□□ -1.78
YCK3P39962 YHR080CYHR080C 4038 nt3.95□□□□□ -1.78
YCK3P39962 YBL006W-AYBL006W-A 150 nt3.95□□□□□ -1.78
YCK3P39962 STB4YMR019W 2850 nt3.94□□□□□ -1.78
YCK3P39962 LRG1YDL240W 3054 nt3.94□□□□□ -1.78
YCK3P39962 GCV2YMR189W 3105 nt3.94□□□□□ -1.78
YCK3P39962 PIM1YBL022C 3402 nt3.93□□□□□ -1.78
YCK3P39962 SEG1YMR086W 2883 nt3.93□□□□□ -1.78
YCK3P39962 KAP114YGL241W 3015 nt3.92□□□□□ -1.78
YCK3P39962 SYT1YPR095C 3681 nt3.92□□□□□ -1.78
YCK3P39962 CHD1YER164W 4407 nt3.92□□□□□ -1.78
YCK3P39962 snR69snR69 101 nt3.92□□□□□ -1.78
YCK3P39962 POL5YEL055C 3069 nt3.92□□□□□ -1.78
YCK3P39962 CAT8YMR280C 4302 nt3.91□□□□□ -1.78
YCK3P39962 GSC2YGR032W 5688 nt3.91□□□□□ -1.78
YCK3P39962 NUP100YKL068W 2880 nt3.91□□□□□ -1.78
YCK3P39962 IKI3YLR384C 4050 nt3.9□□□□□ -1.78
YCK3P39962 YMR196WYMR196W 3267 nt3.9□□□□□ -1.78
YCK3P39962 YGR269WYGR269W 327 nt3.9□□□□□ -1.79
YCK3P39962 SXM1YDR395W 2835 nt3.89□□□□□ -1.79
YCK3P39962 SCP160YJL080C 3669 nt3.89□□□□□ -1.79
YCK3P39962 MDS3YGL197W 4464 nt3.89□□□□□ -1.79
YCK3P39962 BUD2YKL092C 3315 nt3.88□□□□□ -1.79
YCK3P39962 TIF4632YGL049C 2745 nt3.88□□□□□ -1.79
YCK3P39962 FAR11YNL127W 2862 nt3.88□□□□□ -1.79
YCK3P39962 VMR1YHL035C 4779 nt3.87□□□□□ -1.79
YCK3P39962 MSH5YDL154W 2706 nt3.87□□□□□ -1.79
YCK3P39962 SEC8YPR055W 3198 nt3.86□□□□□ -1.79
YCK3P39962 PMR1YGL167C 2853 nt3.86□□□□□ -1.79
YCK3P39962 MYO2YOR326W 4725 nt3.86□□□□□ -1.79
YCK3P39962 NFT1YKR103W 3657 nt3.85□□□□□ -1.79
YCK3P39962 APC1YNL172W 5247 nt3.85□□□□□ -1.79
YCK3P39962 RGA1YOR127W 3024 nt3.84□□□□□ -1.79
YCK3P39962 STE6YKL209C 3873 nt3.84□□□□□ -1.79
YCK3P39962 HRD3YLR207W 2502 nt3.84□□□□□ -1.79
YCK3P39962 SYH1YPL105C 2550 nt3.84□□□□□ -1.8
YCK3P39962 OSH2YDL019C 3852 nt3.84□□□□□ -1.8
YCK3P39962 YPR160W-AYPR160W-A 81 nt3.83□□□□□ -1.8
YCK3P39962 ALY2YJL084C 3141 nt3.83□□□□□ -1.8
YCK3P39962 YDL073WYDL073W 2955 nt3.82□□□□□ -1.8
YCK3P39962 STO1YMR125W 2586 nt3.82□□□□□ -1.8
YCK3P39962 XRN1YGL173C 4587 nt3.82□□□□□ -1.8
YCK3P39962 SNA2YDR525W-A 240 nt3.82□□□□□ -1.8
YCK3P39962 ESL1YIL151C 3357 nt3.82□□□□□ -1.8
YCK3P39962 PRP6YBR055C 2700 nt3.81□□□□□ -1.8
YCK3P39962 KIN2YLR096W 3444 nt3.81□□□□□ -1.8
YCK3P39962 YGR051CYGR051C 324 nt3.81□□□□□ -1.8
YCK3P39962 MYO5YMR109W 3660 nt3.81□□□□□ -1.8
YCK3P39962 SMC2YFR031C 3513 nt3.81□□□□□ -1.8
YCK3P39962 STE23YLR389C 3084 nt3.81□□□□□ -1.8
YCK3P39962 DIP2YLR129W 2832 nt3.8□□□□□ -1.8
YCK3P39962 POL1YNL102W 4407 nt3.79□□□□□ -1.8
YCK3P39962 tS(AGA)D3tS(AGA)D3 83 nt3.79□□□□□ -1.8
YCK3P39962 GYP5YPL249C 2685 nt3.79□□□□□ -1.8
YCK3P39962 VAC7YNL054W 3498 nt3.78□□□□□ -1.8
YCK3P39962 SAP185YJL098W 3177 nt3.77□□□□□ -1.81
YCK3P39962 TAF1YGR274C 3201 nt3.77□□□□□ -1.81
YCK3P39962 SPO22YIL073C 2928 nt3.77□□□□□ -1.81
YCK3P39962 SNF2YOR290C 5112 nt3.77□□□□□ -1.81
YCK3P39962 TFC3YAL001C 3483 nt3.76□□□□□ -1.81
YCK3P39962 GCN2YDR283C 4980 nt3.76□□□□□ -1.81
YCK3P39962 RTC1YOL138C 4026 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)CtK(CUU)C 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)D1tK(CUU)D1 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)D2tK(CUU)D2 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)E1tK(CUU)E1 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)E2tK(CUU)E2 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)FtK(CUU)F 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)G1tK(CUU)G1 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)G2tK(CUU)G2 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)G3tK(CUU)G3 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)ItK(CUU)I 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)JtK(CUU)J 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)KtK(CUU)K 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)MtK(CUU)M 73 nt3.75□□□□□ -1.81
YCK3P39962 tK(CUU)PtK(CUU)P 73 nt3.75□□□□□ -1.81
YCK3P39962 OSH3YHR073W 2991 nt3.75□□□□□ -1.81
YCK3P39962 YPL216WYPL216W 3309 nt3.75□□□□□ -1.81
YCK3P39962 NST1YNL091W 3723 nt3.74□□□□□ -1.81
YCK3P39962 ATG9YDL149W 2994 nt3.74□□□□□ -1.81
YCK3P39962 YLR364C-AYLR364C-A 123 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms