Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 RLM1YPL089C 2031 nt1.63□□□□□ -2.15
VPS52P39904 RTP1YMR185W 2946 nt1.63□□□□□ -2.15
VPS52P39904 HMRA2YCR096C 360 nt1.63□□□□□ -2.15
VPS52P39904 snR72snR72 98 nt1.63□□□□□ -2.15
VPS52P39904 YHR063W-AYHR063W-A 336 nt1.63□□□□□ -2.15
VPS52P39904 YMR247W-AYMR247W-A 144 nt1.63□□□□□ -2.15
VPS52P39904 SEC63YOR254C 1992 nt1.63□□□□□ -2.15
VPS52P39904 MLH3YPL164C 2148 nt1.63□□□□□ -2.15
VPS52P39904 PEP1YBL017C 4740 nt1.62□□□□□ -2.15
VPS52P39904 FRK1YPL141C 2598 nt1.62□□□□□ -2.15
VPS52P39904 SAS3YBL052C 2496 nt1.62□□□□□ -2.15
VPS52P39904 YDR366CYDR366C 399 nt1.62□□□□□ -2.15
VPS52P39904 YNL144CYNL144C 2223 nt1.62□□□□□ -2.15
VPS52P39904 SRP14YDL092W 441 nt1.61□□□□□ -2.15
VPS52P39904 snR8snR8 190 nt1.61□□□□□ -2.15
VPS52P39904 YGR069WYGR069W 336 nt1.61□□□□□ -2.15
VPS52P39904 SDH2YLL041C 801 nt1.61□□□□□ -2.15
VPS52P39904 HSH155YMR288W 2916 nt1.61□□□□□ -2.15
VPS52P39904 SAC3YDR159W 3906 nt1.61□□□□□ -2.15
VPS52P39904 COG8YML071C 1824 nt1.61□□□□□ -2.15
VPS52P39904 HIR3YJR140C 4947 nt1.61□□□□□ -2.15
VPS52P39904 OST1YJL002C 1431 nt1.6□□□□□ -2.15
VPS52P39904 ALG13YGL047W 609 nt1.6□□□□□ -2.15
VPS52P39904 YJL015CYJL015C 285 nt1.6□□□□□ -2.15
VPS52P39904 YOL160WYOL160W 342 nt1.6□□□□□ -2.15
VPS52P39904 YPL152W-AYPL152W-A 99 nt1.6□□□□□ -2.15
VPS52P39904 MDM20YOL076W 2391 nt1.6□□□□□ -2.15
VPS52P39904 YLR035C-AYLR035C-A 3468 nt1.6□□□□□ -2.15
VPS52P39904 snR60snR60 104 nt1.59□□□□□ -2.15
VPS52P39904 YDL211CYDL211C 1119 nt1.59□□□□□ -2.15
VPS52P39904 DGR2YKL121W 2559 nt1.58□□□□□ -2.16
VPS52P39904 ZIP2YGL249W 2115 nt1.58□□□□□ -2.16
VPS52P39904 YLR422WYLR422W 5799 nt1.58□□□□□ -2.16
VPS52P39904 YMR242W-AYMR242W-A 90 nt1.58□□□□□ -2.16
VPS52P39904 YOR008C-AYOR008C-A 225 nt1.58□□□□□ -2.16
VPS52P39904 YOR108C-AYOR108C-A 210 nt1.58□□□□□ -2.16
VPS52P39904 RAD61YDR014W 1944 nt1.58□□□□□ -2.16
VPS52P39904 LCD1YDR499W 2244 nt1.58□□□□□ -2.16
VPS52P39904 ENV11YGR071C 2583 nt1.57□□□□□ -2.16
VPS52P39904 NIP100YPL174C 2607 nt1.57□□□□□ -2.16
VPS52P39904 NUP192YJL039C 5052 nt1.57□□□□□ -2.16
VPS52P39904 TRM3YDL112W 4311 nt1.57□□□□□ -2.16
VPS52P39904 ANS1YHR126C 480 nt1.57□□□□□ -2.16
VPS52P39904 SCW11YGL028C 1629 nt1.57□□□□□ -2.16
VPS52P39904 APL2YKL135C 2181 nt1.57□□□□□ -2.16
VPS52P39904 CFT1YDR301W 4074 nt1.56□□□□□ -2.16
VPS52P39904 SPT21YMR179W 2277 nt1.56□□□□□ -2.16
VPS52P39904 PKH3YDR466W 2697 nt1.56□□□□□ -2.16
VPS52P39904 MSH6YDR097C 3729 nt1.56□□□□□ -2.16
VPS52P39904 SFB2YNL049C 2631 nt1.56□□□□□ -2.16
VPS52P39904 BRR2YER172C 6492 nt1.55□□□□□ -2.16
VPS52P39904 PIG1YLR273C 1947 nt1.55□□□□□ -2.16
VPS52P39904 HSL1YKL101W 4557 nt1.55□□□□□ -2.16
VPS52P39904 YJR039WYJR039W 3366 nt1.54□□□□□ -2.16
VPS52P39904 PAU3YCR104W 375 nt1.54□□□□□ -2.16
VPS52P39904 SSS1YDR086C 243 nt1.54□□□□□ -2.16
VPS52P39904 YMR158W-BYMR158W-B 321 nt1.54□□□□□ -2.16
VPS52P39904 SPC98YNL126W 2541 nt1.54□□□□□ -2.16
VPS52P39904 YDR182W-AYDR182W-A 204 nt1.53□□□□□ -2.16
VPS52P39904 YEL020C-BYEL020C-B 198 nt1.53□□□□□ -2.16
VPS52P39904 MAD1YGL086W 2250 nt1.53□□□□□ -2.16
VPS52P39904 YNL028WYNL028W 318 nt1.53□□□□□ -2.16
VPS52P39904 RAD34YDR314C 2079 nt1.52□□□□□ -2.17
VPS52P39904 VIK1YPL253C 1944 nt1.52□□□□□ -2.17
VPS52P39904 YCK3YER123W 1575 nt1.52□□□□□ -2.17
VPS52P39904 PAU2YEL049W 363 nt1.52□□□□□ -2.17
VPS52P39904 YGL188C-AYGL188C-A 141 nt1.52□□□□□ -2.17
VPS52P39904 CSE2YNR010W 450 nt1.52□□□□□ -2.17
VPS52P39904 AI5_ALPHAQ0070 1893 nt1.52□□□□□ -2.17
VPS52P39904 MPT5YGL178W 2580 nt1.51□□□□□ -2.17
VPS52P39904 COA6YMR244C-A 315 nt1.51□□□□□ -2.17
VPS52P39904 snR49snR49 165 nt1.51□□□□□ -2.17
VPS52P39904 PMD1YER132C 5262 nt1.5□□□□□ -2.17
VPS52P39904 MEC1YBR136W 7107 nt1.49□□□□□ -2.17
VPS52P39904 RPL34BYIL052C 366 nt1.49□□□□□ -2.17
VPS52P39904 INA22YIR024C 651 nt1.49□□□□□ -2.17
VPS52P39904 YIR044CYIR044C 186 nt1.49□□□□□ -2.17
VPS52P39904 YGR109W-BYGR109W-B 4644 nt1.49□□□□□ -2.17
VPS52P39904 SBE22YHR103W 2559 nt1.49□□□□□ -2.17
VPS52P39904 YMR175W-AYMR175W-A 195 nt1.48□□□□□ -2.17
VPS52P39904 NOC3YLR002C 1992 nt1.48□□□□□ -2.17
VPS52P39904 CHS1YNL192W 3396 nt1.48□□□□□ -2.17
VPS52P39904 TBS1YBR150C 3285 nt1.48□□□□□ -2.17
VPS52P39904 YBR064WYBR064W 429 nt1.47□□□□□ -2.17
VPS52P39904 SSK2YNR031C 4740 nt1.47□□□□□ -2.17
VPS52P39904 CUL3YGR003W 2235 nt1.47□□□□□ -2.17
VPS52P39904 BPH1YCR032W 6504 nt1.47□□□□□ -2.17
VPS52P39904 IRA1YBR140C 9279 nt1.47□□□□□ -2.17
VPS52P39904 SKI3YPR189W 4299 nt1.46□□□□□ -2.18
VPS52P39904 EMC5YIL027C 426 nt1.45□□□□□ -2.18
VPS52P39904 YJL197C-AYJL197C-A 282 nt1.45□□□□□ -2.18
VPS52P39904 YLR120W-AYLR120W-A 102 nt1.45□□□□□ -2.18
VPS52P39904 YMR172C-AYMR172C-A 384 nt1.45□□□□□ -2.18
VPS52P39904 YMR321CYMR321C 318 nt1.45□□□□□ -2.18
VPS52P39904 YOL155W-AYOL155W-A 135 nt1.45□□□□□ -2.18
VPS52P39904 YOR218CYOR218C 420 nt1.45□□□□□ -2.18
VPS52P39904 SPO24YPR036W-A 204 nt1.45□□□□□ -2.18
VPS52P39904 PDE2YOR360C 1581 nt1.45□□□□□ -2.18
VPS52P39904 YOR019WYOR019W 2193 nt1.45□□□□□ -2.18
VPS52P39904 SPO75YLL005C 2607 nt1.45□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms