Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 MVP1YMR004W 1536 nt2.01□□□□□ -2.09
VPS8P39702 LYS14YDR034C 2373 nt2.01□□□□□ -2.09
VPS8P39702 IRE1YHR079C 3348 nt2.01□□□□□ -2.09
VPS8P39702 BPH1YCR032W 6504 nt2.01□□□□□ -2.09
VPS8P39702 IRR1YIL026C 3453 nt2.01□□□□□ -2.09
VPS8P39702 PAU18YLL064C 363 nt2.01□□□□□ -2.09
VPS8P39702 PAU6YNR076W 363 nt2.01□□□□□ -2.09
VPS8P39702 HSH155YMR288W 2916 nt2.01□□□□□ -2.09
VPS8P39702 SCW11YGL028C 1629 nt2□□□□□ -2.09
VPS8P39702 PAU3YCR104W 375 nt2□□□□□ -2.09
VPS8P39702 JLP2YMR132C 627 nt2□□□□□ -2.09
VPS8P39702 YER088C-AYER088C-A 324 nt1.99□□□□□ -2.09
VPS8P39702 YOL155W-AYOL155W-A 135 nt1.99□□□□□ -2.09
VPS8P39702 MAK10YEL053C 2202 nt1.99□□□□□ -2.09
VPS8P39702 CTR9YOL145C 3234 nt1.98□□□□□ -2.09
VPS8P39702 ZRG17YNR039C 1818 nt1.98□□□□□ -2.09
VPS8P39702 YJR039WYJR039W 3366 nt1.98□□□□□ -2.09
VPS8P39702 snR72snR72 98 nt1.98□□□□□ -2.09
VPS8P39702 YEL020C-BYEL020C-B 198 nt1.98□□□□□ -2.09
VPS8P39702 YNL028WYNL028W 318 nt1.98□□□□□ -2.09
VPS8P39702 MSH6YDR097C 3729 nt1.97□□□□□ -2.09
VPS8P39702 HSL1YKL101W 4557 nt1.97□□□□□ -2.09
VPS8P39702 SPT21YMR179W 2277 nt1.97□□□□□ -2.09
VPS8P39702 LCD1YDR499W 2244 nt1.97□□□□□ -2.09
VPS8P39702 snR80snR80 171 nt1.97□□□□□ -2.09
VPS8P39702 CDC36YDL165W 576 nt1.97□□□□□ -2.09
VPS8P39702 BLI1YKL061W 342 nt1.97□□□□□ -2.09
VPS8P39702 IRA1YBR140C 9279 nt1.96□□□□□ -2.09
VPS8P39702 SAS3YBL052C 2496 nt1.96□□□□□ -2.1
VPS8P39702 snR55snR55 98 nt1.96□□□□□ -2.1
VPS8P39702 ABF2YMR072W 552 nt1.96□□□□□ -2.1
VPS8P39702 YBR064WYBR064W 429 nt1.96□□□□□ -2.1
VPS8P39702 MYO2YOR326W 4725 nt1.96□□□□□ -2.1
VPS8P39702 YLL032CYLL032C 2478 nt1.95□□□□□ -2.1
VPS8P39702 TRM3YDL112W 4311 nt1.95□□□□□ -2.1
VPS8P39702 CSE2YNR010W 450 nt1.95□□□□□ -2.1
VPS8P39702 HMI1YOL095C 2121 nt1.95□□□□□ -2.1
VPS8P39702 VIK1YPL253C 1944 nt1.95□□□□□ -2.1
VPS8P39702 FRK1YPL141C 2598 nt1.95□□□□□ -2.1
VPS8P39702 YDR003W-AYDR003W-A 123 nt1.94□□□□□ -2.1
VPS8P39702 YDR406W-AYDR406W-A 246 nt1.94□□□□□ -2.1
VPS8P39702 YGL041CYGL041C 204 nt1.94□□□□□ -2.1
VPS8P39702 YMR046W-AYMR046W-A 129 nt1.94□□□□□ -2.1
VPS8P39702 YNL144CYNL144C 2223 nt1.94□□□□□ -2.1
VPS8P39702 CFT1YDR301W 4074 nt1.94□□□□□ -2.1
VPS8P39702 UBR2YLR024C 5619 nt1.94□□□□□ -2.1
VPS8P39702 SSS1YDR086C 243 nt1.93□□□□□ -2.1
VPS8P39702 YNL337WYNL337W 255 nt1.93□□□□□ -2.1
VPS8P39702 PKH3YDR466W 2697 nt1.93□□□□□ -2.1
VPS8P39702 ADR1YDR216W 3972 nt1.92□□□□□ -2.1
VPS8P39702 SRP14YDL092W 441 nt1.92□□□□□ -2.1
VPS8P39702 COA6YMR244C-A 315 nt1.92□□□□□ -2.1
VPS8P39702 MSC6YOR354C 2079 nt1.92□□□□□ -2.1
VPS8P39702 MDM20YOL076W 2391 nt1.91□□□□□ -2.1
VPS8P39702 MEC1YBR136W 7107 nt1.91□□□□□ -2.1
VPS8P39702 YJL197C-AYJL197C-A 282 nt1.91□□□□□ -2.1
VPS8P39702 FIG2YCR089W 4830 nt1.91□□□□□ -2.1
VPS8P39702 RLM1YPL089C 2031 nt1.91□□□□□ -2.1
VPS8P39702 DNF3YMR162C 4971 nt1.91□□□□□ -2.1
VPS8P39702 HIR3YJR140C 4947 nt1.91□□□□□ -2.1
VPS8P39702 LHS1YKL073W 2646 nt1.9□□□□□ -2.1
VPS8P39702 TBS1YBR150C 3285 nt1.9□□□□□ -2.1
VPS8P39702 YGL052WYGL052W 306 nt1.9□□□□□ -2.11
VPS8P39702 LRE1YCL051W 1752 nt1.9□□□□□ -2.11
VPS8P39702 YMR307C-AYMR307C-A 195 nt1.89□□□□□ -2.11
VPS8P39702 YOR108C-AYOR108C-A 210 nt1.89□□□□□ -2.11
VPS8P39702 MLH3YPL164C 2148 nt1.89□□□□□ -2.11
VPS8P39702 PDE2YOR360C 1581 nt1.89□□□□□ -2.11
VPS8P39702 SFB2YNL049C 2631 nt1.88□□□□□ -2.11
VPS8P39702 ZIP2YGL249W 2115 nt1.88□□□□□ -2.11
VPS8P39702 IRC20YLR247C 4671 nt1.88□□□□□ -2.11
VPS8P39702 NUP192YJL039C 5052 nt1.87□□□□□ -2.11
VPS8P39702 YCR018C-AYCR018C-A 255 nt1.87□□□□□ -2.11
VPS8P39702 YMR242W-AYMR242W-A 90 nt1.87□□□□□ -2.11
VPS8P39702 YOL160WYOL160W 342 nt1.87□□□□□ -2.11
VPS8P39702 YOR218CYOR218C 420 nt1.87□□□□□ -2.11
VPS8P39702 PAU2YEL049W 363 nt1.86□□□□□ -2.11
VPS8P39702 YHR210CYHR210C 1026 nt1.86□□□□□ -2.11
VPS8P39702 YMR321CYMR321C 318 nt1.86□□□□□ -2.11
VPS8P39702 YLR120W-AYLR120W-A 102 nt1.85□□□□□ -2.11
VPS8P39702 YMR172C-AYMR172C-A 384 nt1.85□□□□□ -2.11
VPS8P39702 YMR230W-AYMR230W-A 189 nt1.85□□□□□ -2.11
VPS8P39702 YMR247W-AYMR247W-A 144 nt1.85□□□□□ -2.11
VPS8P39702 DGR2YKL121W 2559 nt1.85□□□□□ -2.11
VPS8P39702 YCK3YER123W 1575 nt1.85□□□□□ -2.11
VPS8P39702 INA22YIR024C 651 nt1.84□□□□□ -2.11
VPS8P39702 PFD1YJL179W 330 nt1.84□□□□□ -2.11
VPS8P39702 MSH5YDL154W 2706 nt1.83□□□□□ -2.12
VPS8P39702 GPG1YGL121C 381 nt1.83□□□□□ -2.12
VPS8P39702 IES4YOR189W 351 nt1.83□□□□□ -2.12
VPS8P39702 SPC98YNL126W 2541 nt1.83□□□□□ -2.12
VPS8P39702 VPS54YDR027C 2670 nt1.83□□□□□ -2.12
VPS8P39702 RPS27BYHR021C 249 nt1.82□□□□□ -2.12
VPS8P39702 tT(UGU)HtT(UGU)H 72 nt1.82□□□□□ -2.12
VPS8P39702 RPL34BYIL052C 366 nt1.82□□□□□ -2.12
VPS8P39702 YOR015WYOR015W 360 nt1.82□□□□□ -2.12
VPS8P39702 CTF4YPR135W 2784 nt1.82□□□□□ -2.12
VPS8P39702 SKI3YPR189W 4299 nt1.82□□□□□ -2.12
VPS8P39702 MAD1YGL086W 2250 nt1.82□□□□□ -2.12
VPS8P39702 AI5_ALPHAQ0070 1893 nt1.82□□□□□ -2.12
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms