Protein–RNA interactions for Protein: P38811

TRA1, Transcription-associated protein 1, yeastyeast

Predictions only

Length 3,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRA1P38811 YML007C-AYML007C-A 111 nt-1.17□□□□□ -2.6
TRA1P38811 YBL062WYBL062W 381 nt-1.17□□□□□ -2.6
TRA1P38811 BLS1YLR408C 369 nt-1.18□□□□□ -2.6
TRA1P38811 VPS20YMR077C 666 nt-1.18□□□□□ -2.6
TRA1P38811 TMA20YER007C-A 546 nt-1.19□□□□□ -2.6
TRA1P38811 YBR201C-AYBR201C-A 204 nt-1.19□□□□□ -2.6
TRA1P38811 YCR090CYCR090C 549 nt-1.19□□□□□ -2.6
TRA1P38811 YPL044CYPL044C 549 nt-1.19□□□□□ -2.6
TRA1P38811 RTC6YPL183W-A 282 nt-1.2□□□□□ -2.6
TRA1P38811 YNR021WYNR021W 1215 nt-1.21□□□□□ -2.6
TRA1P38811 CHZ1YER030W 462 nt-1.21□□□□□ -2.6
TRA1P38811 BSC3YLR465C 309 nt-1.21□□□□□ -2.6
TRA1P38811 PCL2YDL127W 927 nt-1.22□□□□□ -2.6
TRA1P38811 GPX2YBR244W 489 nt-1.22□□□□□ -2.6
TRA1P38811 YIL089WYIL089W 618 nt-1.22□□□□□ -2.6
TRA1P38811 CSM4YPL200W 471 nt-1.22□□□□□ -2.6
TRA1P38811 YPR014CYPR014C 330 nt-1.22□□□□□ -2.61
TRA1P38811 YGR064WYGR064W 369 nt-1.23□□□□□ -2.61
TRA1P38811 SWM2YNR004W 441 nt-1.23□□□□□ -2.61
TRA1P38811 YIL066W-AYIL066W-A 444 nt-1.23□□□□□ -2.61
TRA1P38811 OST4YDL232W 111 nt-1.23□□□□□ -2.61
TRA1P38811 YOL160WYOL160W 342 nt-1.23□□□□□ -2.61
TRA1P38811 YCR100CYCR100C 951 nt-1.24□□□□□ -2.61
TRA1P38811 YDR320W-BYDR320W-B 138 nt-1.24□□□□□ -2.61
TRA1P38811 YHR139C-AYHR139C-A 312 nt-1.24□□□□□ -2.61
TRA1P38811 tA(UGC)QtA(UGC)Q 76 nt-1.25□□□□□ -2.61
TRA1P38811 PFS1YHR185C 714 nt-1.25□□□□□ -2.61
TRA1P38811 CLG1YGL215W 1359 nt-1.25□□□□□ -2.61
TRA1P38811 NOT5YPR072W 1683 nt-1.26□□□□□ -2.61
TRA1P38811 snR35snR35 204 nt-1.26□□□□□ -2.61
TRA1P38811 BET4YJL031C 984 nt-1.26□□□□□ -2.61
TRA1P38811 RFA3YJL173C 369 nt-1.26□□□□□ -2.61
TRA1P38811 YHR138CYHR138C 345 nt-1.27□□□□□ -2.61
TRA1P38811 YLR287CYLR287C 1068 nt-1.27□□□□□ -2.61
TRA1P38811 DXO1YDR370C 1329 nt-1.27□□□□□ -2.61
TRA1P38811 YLR458WYLR458W 381 nt-1.27□□□□□ -2.61
TRA1P38811 GIM5YML094W 492 nt-1.28□□□□□ -2.61
TRA1P38811 YPL185WYPL185W 396 nt-1.28□□□□□ -2.61
TRA1P38811 PCF11YDR228C 1881 nt-1.28□□□□□ -2.61
TRA1P38811 PHO80YOL001W 882 nt-1.28□□□□□ -2.61
TRA1P38811 tP(UGG)QtP(UGG)Q 72 nt-1.29□□□□□ -2.62
TRA1P38811 YHL042WYHL042W 453 nt-1.29□□□□□ -2.62
TRA1P38811 YPR160W-AYPR160W-A 81 nt-1.3□□□□□ -2.62
TRA1P38811 YLR311CYLR311C 348 nt-1.3□□□□□ -2.62
TRA1P38811 TAP42YMR028W 1101 nt-1.31□□□□□ -2.62
TRA1P38811 MIX23YBL107C 591 nt-1.31□□□□□ -2.62
TRA1P38811 RPS10AYOR293W 318 nt-1.31□□□□□ -2.62
TRA1P38811 BI3Q0115 1554 nt-1.31□□□□□ -2.62
TRA1P38811 BLI1YKL061W 342 nt-1.31□□□□□ -2.62
TRA1P38811 PAU9YBL108C-A 129 nt-1.32□□□□□ -2.62
TRA1P38811 UBS1YBR165W 834 nt-1.32□□□□□ -2.62
TRA1P38811 YLL032CYLL032C 2478 nt-1.32□□□□□ -2.62
TRA1P38811 MED11YMR112C 396 nt-1.32□□□□□ -2.62
TRA1P38811 YMR141W-AYMR141W-A 225 nt-1.33□□□□□ -2.62
TRA1P38811 YOR248WYOR248W 303 nt-1.33□□□□□ -2.62
TRA1P38811 snR44snR44 211 nt-1.34□□□□□ -2.62
TRA1P38811 YER079WYER079W 633 nt-1.35□□□□□ -2.62
TRA1P38811 YHL048C-AYHL048C-A 135 nt-1.35□□□□□ -2.63
TRA1P38811 RPS10BYMR230W 318 nt-1.35□□□□□ -2.63
TRA1P38811 SUS1YBR111W-A 291 nt-1.35□□□□□ -2.63
TRA1P38811 RRI2YOL117W 1938 nt-1.36□□□□□ -2.63
TRA1P38811 BI4Q0120 1917 nt-1.36□□□□□ -2.63
TRA1P38811 PAA1YDR071C 576 nt-1.37□□□□□ -2.63
TRA1P38811 YFR010W-AYFR010W-A 189 nt-1.37□□□□□ -2.63
TRA1P38811 EAF6YJR082C 342 nt-1.37□□□□□ -2.63
TRA1P38811 YLR041WYLR041W 321 nt-1.37□□□□□ -2.63
TRA1P38811 ISA2YPR067W 558 nt-1.37□□□□□ -2.63
TRA1P38811 YLR399W-AYLR399W-A 105 nt-1.38□□□□□ -2.63
TRA1P38811 COX6YHR051W 447 nt-1.38□□□□□ -2.63
TRA1P38811 DCP1YOL149W 696 nt-1.39□□□□□ -2.63
TRA1P38811 NTC20YBR188C 423 nt-1.39□□□□□ -2.63
TRA1P38811 YGR114CYGR114C 390 nt-1.39□□□□□ -2.63
TRA1P38811 YJL127C-BYJL127C-B 159 nt-1.39□□□□□ -2.63
TRA1P38811 YDL068WYDL068W 330 nt-1.39□□□□□ -2.63
TRA1P38811 SEM1YDR363W-A 270 nt-1.39□□□□□ -2.63
TRA1P38811 SRP14YDL092W 441 nt-1.4□□□□□ -2.63
TRA1P38811 YDR182W-AYDR182W-A 204 nt-1.4□□□□□ -2.63
TRA1P38811 SNU56YDR240C 1479 nt-1.4□□□□□ -2.63
TRA1P38811 KAR1YNL188W 1302 nt-1.41□□□□□ -2.63
TRA1P38811 COG1YGL223C 1254 nt-1.41□□□□□ -2.63
TRA1P38811 YJL182CYJL182C 318 nt-1.41□□□□□ -2.63
TRA1P38811 RMD5YDR255C 1266 nt-1.41□□□□□ -2.64
TRA1P38811 VAM3YOR106W 852 nt-1.42□□□□□ -2.64
TRA1P38811 SUT2YPR009W 807 nt-1.42□□□□□ -2.64
TRA1P38811 YHR131W-AYHR131W-A 246 nt-1.42□□□□□ -2.64
TRA1P38811 APQ12YIL040W 417 nt-1.43□□□□□ -2.64
TRA1P38811 YKL023C-AYKL023C-A 228 nt-1.43□□□□□ -2.64
TRA1P38811 BET5YML077W 480 nt-1.43□□□□□ -2.64
TRA1P38811 SHE3YBR130C 1278 nt-1.43□□□□□ -2.64
TRA1P38811 YBR184WYBR184W 1572 nt-1.43□□□□□ -2.64
TRA1P38811 snR68snR68 136 nt-1.43□□□□□ -2.64
TRA1P38811 TCA17YEL048C 459 nt-1.43□□□□□ -2.64
TRA1P38811 RRT1YBL048W 312 nt-1.43□□□□□ -2.64
TRA1P38811 YPL182CYPL182C 384 nt-1.43□□□□□ -2.64
TRA1P38811 YBL029WYBL029W 1131 nt-1.44□□□□□ -2.64
TRA1P38811 YMR158C-AYMR158C-A 138 nt-1.45□□□□□ -2.64
TRA1P38811 PMP2YEL017C-A 132 nt-1.45□□□□□ -2.64
TRA1P38811 YOR161W-AYOR161W-A 81 nt-1.45□□□□□ -2.64
TRA1P38811 RDS3YPR094W 324 nt-1.46□□□□□ -2.64
TRA1P38811 GPX1YKL026C 504 nt-1.47□□□□□ -2.64
Retrieved 100 of 7,029 protein–RNA pairs in 82.5 ms