Protein–RNA interactions for Protein: P38779

CIC1, Proteasome-interacting protein CIC1, yeastyeast

Known RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIC1P38779 YOR142W-BYOR142W-B 5268 nt2.7□□□□□ -1.98
CIC1P38779 YPL257W-BYPL257W-B 5268 nt2.7□□□□□ -1.98
CIC1P38779 YPR158W-BYPR158W-B 5271 nt2.7□□□□□ -1.98
CIC1P38779 YDR182W-AYDR182W-A 204 nt2.7□□□□□ -1.98
CIC1P38779 ULI1YFR026C 510 nt2.7□□□□□ -1.98
CIC1P38779 YLR154W-AYLR154W-A 186 nt2.7□□□□□ -1.98
CIC1P38779 PSD2YGR170W 3417 nt2.7□□□□□ -1.98
CIC1P38779 SGM1YJR134C 2124 nt2.69□□□□□ -1.98
CIC1P38779 ENV11YGR071C 2583 nt2.69□□□□□ -1.98
CIC1P38779 YGR164WYGR164W 336 nt2.69□□□□□ -1.98
CIC1P38779 YMR242W-AYMR242W-A 90 nt2.69□□□□□ -1.98
CIC1P38779 YOR381W-AYOR381W-A 168 nt2.69□□□□□ -1.98
CIC1P38779 NAM7YMR080C 2916 nt2.69□□□□□ -1.98
CIC1P38779 YBL005W-BYBL005W-B 5268 nt2.69□□□□□ -1.98
CIC1P38779 TOP2YNL088W 4287 nt2.68□□□□□ -1.98
CIC1P38779 NOP14YDL148C 2433 nt2.68□□□□□ -1.98
CIC1P38779 RPS25BYLR333C 327 nt2.67□□□□□ -1.98
CIC1P38779 RPS17AYML024W 411 nt2.67□□□□□ -1.98
CIC1P38779 RLM1YPL089C 2031 nt2.67□□□□□ -1.98
CIC1P38779 RAD34YDR314C 2079 nt2.67□□□□□ -1.98
CIC1P38779 SCD5YOR329C 2619 nt2.66□□□□□ -1.98
CIC1P38779 SMC6YLR383W 3345 nt2.66□□□□□ -1.98
CIC1P38779 YCR102W-AYCR102W-A 198 nt2.66□□□□□ -1.98
CIC1P38779 ATP7YKL016C 525 nt2.66□□□□□ -1.98
CIC1P38779 CAT2YML042W 2013 nt2.66□□□□□ -1.98
CIC1P38779 MLH1YMR167W 2310 nt2.65□□□□□ -1.98
CIC1P38779 APL5YPL195W 2799 nt2.65□□□□□ -1.99
CIC1P38779 TFC8YPL007C 1767 nt2.65□□□□□ -1.99
CIC1P38779 NAB6YML117W 3405 nt2.65□□□□□ -1.99
CIC1P38779 COF1YLL050C 432 nt2.65□□□□□ -1.99
CIC1P38779 ZIP2YGL249W 2115 nt2.65□□□□□ -1.99
CIC1P38779 VPS13YLL040C 9435 nt2.64□□□□□ -1.99
CIC1P38779 VTC1YER072W 390 nt2.64□□□□□ -1.99
CIC1P38779 KTI11YBL071W-A 249 nt2.64□□□□□ -1.99
CIC1P38779 YOR072W-BYOR072W-B 162 nt2.64□□□□□ -1.99
CIC1P38779 ORC2YBR060C 1863 nt2.64□□□□□ -1.99
CIC1P38779 ZIP1YDR285W 2628 nt2.64□□□□□ -1.99
CIC1P38779 ELG1YOR144C 2376 nt2.64□□□□□ -1.99
CIC1P38779 NOC3YLR002C 1992 nt2.63□□□□□ -1.99
CIC1P38779 YOR108C-AYOR108C-A 210 nt2.63□□□□□ -1.99
CIC1P38779 YOR161W-BYOR161W-B 261 nt2.63□□□□□ -1.99
CIC1P38779 YFR016CYFR016C 3702 nt2.63□□□□□ -1.99
CIC1P38779 RPL33BYOR234C 324 nt2.62□□□□□ -1.99
CIC1P38779 APL2YKL135C 2181 nt2.61□□□□□ -1.99
CIC1P38779 CUL3YGR003W 2235 nt2.61□□□□□ -1.99
CIC1P38779 UBP15YMR304W 3693 nt2.61□□□□□ -1.99
CIC1P38779 SAS3YBL052C 2496 nt2.61□□□□□ -1.99
CIC1P38779 MAD1YGL086W 2250 nt2.61□□□□□ -1.99
CIC1P38779 KRE33YNL132W 3171 nt2.61□□□□□ -1.99
CIC1P38779 RPL31AYDL075W 342 nt2.61□□□□□ -1.99
CIC1P38779 YOR345CYOR345C 351 nt2.61□□□□□ -1.99
CIC1P38779 TFC3YAL001C 3483 nt2.61□□□□□ -1.99
CIC1P38779 SPF1YEL031W 3648 nt2.61□□□□□ -1.99
CIC1P38779 MSH5YDL154W 2706 nt2.61□□□□□ -1.99
CIC1P38779 DNF1YER166W 4716 nt2.6□□□□□ -1.99
CIC1P38779 CSF1YLR087C 8877 nt2.59□□□□□ -1.99
CIC1P38779 DCP2YNL118C 2913 nt2.59□□□□□ -1.99
CIC1P38779 YDR341CYDR341C 1824 nt2.58□□□□□ -2
CIC1P38779 SIR3YLR442C 2937 nt2.58□□□□□ -2
CIC1P38779 MAK10YEL053C 2202 nt2.58□□□□□ -2
CIC1P38779 RTT107YHR154W 3213 nt2.58□□□□□ -2
CIC1P38779 PMP1YCR024C-A 123 nt2.58□□□□□ -2
CIC1P38779 YNL205CYNL205C 423 nt2.58□□□□□ -2
CIC1P38779 SAP190YKR028W 3102 nt2.57□□□□□ -2
CIC1P38779 PAU3YCR104W 375 nt2.57□□□□□ -2
CIC1P38779 YEL073CYEL073C 324 nt2.57□□□□□ -2
CIC1P38779 YIR044CYIR044C 186 nt2.57□□□□□ -2
CIC1P38779 YOL098CYOL098C 3114 nt2.57□□□□□ -2
CIC1P38779 RAV1YJR033C 4074 nt2.57□□□□□ -2
CIC1P38779 TRL1YJL087C 2484 nt2.57□□□□□ -2
CIC1P38779 GIP3YPL137C 3831 nt2.56□□□□□ -2
CIC1P38779 YDL196WYDL196W 330 nt2.56□□□□□ -2
CIC1P38779 BRP1YGL007W 378 nt2.55□□□□□ -2
CIC1P38779 YHR210CYHR210C 1026 nt2.55□□□□□ -2
CIC1P38779 YLL019W-AYLL019W-A 93 nt2.55□□□□□ -2
CIC1P38779 HAL9YOL089C 3093 nt2.55□□□□□ -2
CIC1P38779 EDS1YBR033W 2760 nt2.55□□□□□ -2
CIC1P38779 MLH3YPL164C 2148 nt2.54□□□□□ -2
CIC1P38779 NCA2YPR155C 1851 nt2.54□□□□□ -2
CIC1P38779 SYH1YPL105C 2550 nt2.54□□□□□ -2
CIC1P38779 YIL020C-AYIL020C-A 339 nt2.54□□□□□ -2
CIC1P38779 COY1YKL179C 2040 nt2.54□□□□□ -2
CIC1P38779 YLL007CYLL007C 1998 nt2.53□□□□□ -2
CIC1P38779 YKR075W-AYKR075W-A 270 nt2.53□□□□□ -2
CIC1P38779 snR85snR85 171 nt2.52□□□□□ -2.01
CIC1P38779 CHC1YGL206C 4962 nt2.52□□□□□ -2.01
CIC1P38779 UTP22YGR090W 3714 nt2.52□□□□□ -2.01
CIC1P38779 CDC60YPL160W 3273 nt2.51□□□□□ -2.01
CIC1P38779 PIG1YLR273C 1947 nt2.51□□□□□ -2.01
CIC1P38779 RPL37BYDR500C 267 nt2.51□□□□□ -2.01
CIC1P38779 UBP1YDL122W 2430 nt2.51□□□□□ -2.01
CIC1P38779 SAP185YJL098W 3177 nt2.51□□□□□ -2.01
CIC1P38779 AHC1YOR023C 1701 nt2.51□□□□□ -2.01
CIC1P38779 PRP42YDR235W 1635 nt2.5□□□□□ -2.01
CIC1P38779 DGR2YKL121W 2559 nt2.5□□□□□ -2.01
CIC1P38779 YJL052C-AYJL052C-A 120 nt2.5□□□□□ -2.01
CIC1P38779 YPR097WYPR097W 3222 nt2.5□□□□□ -2.01
CIC1P38779 FIG4YNL325C 2640 nt2.5□□□□□ -2.01
CIC1P38779 PTP2YOR208W 2253 nt2.49□□□□□ -2.01
CIC1P38779 snR48snR48 113 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms