Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YHR210CYHR210C 1026 nt2.26□□□□□ -2.05
TDP1P38319 RPB10YOR210W 213 nt2.26□□□□□ -2.05
TDP1P38319 RPL33BYOR234C 324 nt2.26□□□□□ -2.05
TDP1P38319 GIP3YPL137C 3831 nt2.26□□□□□ -2.05
TDP1P38319 SWI6YLR182W 2412 nt2.26□□□□□ -2.05
TDP1P38319 NIP100YPL174C 2607 nt2.25□□□□□ -2.05
TDP1P38319 RIC1YLR039C 3171 nt2.25□□□□□ -2.05
TDP1P38319 VMR1YHL035C 4779 nt2.25□□□□□ -2.05
TDP1P38319 SNF5YBR289W 2718 nt2.25□□□□□ -2.05
TDP1P38319 TIM9YEL020W-A 264 nt2.25□□□□□ -2.05
TDP1P38319 MCM10YIL150C 1716 nt2.25□□□□□ -2.05
TDP1P38319 RPL42BYHR141C 321 nt2.24□□□□□ -2.05
TDP1P38319 RPL42AYNL162W 321 nt2.24□□□□□ -2.05
TDP1P38319 BNI1YNL271C 5862 nt2.24□□□□□ -2.05
TDP1P38319 STB4YMR019W 2850 nt2.24□□□□□ -2.05
TDP1P38319 RFX1YLR176C 2436 nt2.23□□□□□ -2.05
TDP1P38319 SCD5YOR329C 2619 nt2.23□□□□□ -2.05
TDP1P38319 SEC16YPL085W 6588 nt2.23□□□□□ -2.05
TDP1P38319 YOR345CYOR345C 351 nt2.23□□□□□ -2.05
TDP1P38319 SPO75YLL005C 2607 nt2.23□□□□□ -2.05
TDP1P38319 MET18YIL128W 3099 nt2.23□□□□□ -2.05
TDP1P38319 SPC98YNL126W 2541 nt2.22□□□□□ -2.05
TDP1P38319 STH1YIL126W 4080 nt2.22□□□□□ -2.05
TDP1P38319 SCH9YHR205W 2475 nt2.22□□□□□ -2.05
TDP1P38319 IRC8YJL051W 2469 nt2.22□□□□□ -2.05
TDP1P38319 YHR180W-AYHR180W-A 183 nt2.22□□□□□ -2.05
TDP1P38319 IRR1YIL026C 3453 nt2.22□□□□□ -2.05
TDP1P38319 TFC3YAL001C 3483 nt2.22□□□□□ -2.05
TDP1P38319 MGM1YOR211C 2646 nt2.21□□□□□ -2.05
TDP1P38319 YIR044CYIR044C 186 nt2.21□□□□□ -2.06
TDP1P38319 YOR394C-AYOR394C-A 168 nt2.21□□□□□ -2.06
TDP1P38319 YOL098CYOL098C 3114 nt2.21□□□□□ -2.06
TDP1P38319 SLY1YDR189W 2001 nt2.2□□□□□ -2.06
TDP1P38319 SAP185YJL098W 3177 nt2.2□□□□□ -2.06
TDP1P38319 YDR182W-AYDR182W-A 204 nt2.2□□□□□ -2.06
TDP1P38319 YOR072W-BYOR072W-B 162 nt2.2□□□□□ -2.06
TDP1P38319 YBR174CYBR174C 315 nt2.2□□□□□ -2.06
TDP1P38319 MNE1YOR350C 1992 nt2.19□□□□□ -2.06
TDP1P38319 YHR073W-AYHR073W-A 177 nt2.19□□□□□ -2.06
TDP1P38319 YBL012CYBL012C 402 nt2.19□□□□□ -2.06
TDP1P38319 MNL2YLR057W 2550 nt2.19□□□□□ -2.06
TDP1P38319 SPO21YOL091W 1830 nt2.19□□□□□ -2.06
TDP1P38319 ELG1YOR144C 2376 nt2.18□□□□□ -2.06
TDP1P38319 COY1YKL179C 2040 nt2.18□□□□□ -2.06
TDP1P38319 SWI5YDR146C 2130 nt2.18□□□□□ -2.06
TDP1P38319 SET2YJL168C 2202 nt2.18□□□□□ -2.06
TDP1P38319 YHR071C-AYHR071C-A 321 nt2.17□□□□□ -2.06
TDP1P38319 TFC8YPL007C 1767 nt2.17□□□□□ -2.06
TDP1P38319 LYS14YDR034C 2373 nt2.17□□□□□ -2.06
TDP1P38319 YPR097WYPR097W 3222 nt2.17□□□□□ -2.06
TDP1P38319 TRL1YJL087C 2484 nt2.16□□□□□ -2.06
TDP1P38319 MSC6YOR354C 2079 nt2.16□□□□□ -2.06
TDP1P38319 SSD1YDR293C 3753 nt2.16□□□□□ -2.06
TDP1P38319 SRP14YDL092W 441 nt2.16□□□□□ -2.06
TDP1P38319 YJL120WYJL120W 324 nt2.16□□□□□ -2.06
TDP1P38319 VTC3YPL019C 2508 nt2.16□□□□□ -2.06
TDP1P38319 USO1YDL058W 5373 nt2.15□□□□□ -2.06
TDP1P38319 NOP14YDL148C 2433 nt2.15□□□□□ -2.07
TDP1P38319 CHC1YGL206C 4962 nt2.14□□□□□ -2.07
TDP1P38319 SPP41YDR464W 4308 nt2.14□□□□□ -2.07
TDP1P38319 YIL071W-AYIL071W-A 477 nt2.14□□□□□ -2.07
TDP1P38319 RPS25BYLR333C 327 nt2.14□□□□□ -2.07
TDP1P38319 SMC6YLR383W 3345 nt2.14□□□□□ -2.07
TDP1P38319 ZRG8YER033C 3231 nt2.13□□□□□ -2.07
TDP1P38319 SLM1YIL105C 2061 nt2.13□□□□□ -2.07
TDP1P38319 YDL196WYDL196W 330 nt2.13□□□□□ -2.07
TDP1P38319 YDR544CYDR544C 429 nt2.13□□□□□ -2.07
TDP1P38319 BRP1YGL007W 378 nt2.13□□□□□ -2.07
TDP1P38319 EMP24YGL200C 612 nt2.13□□□□□ -2.07
TDP1P38319 PAU18YLL064C 363 nt2.13□□□□□ -2.07
TDP1P38319 PAU6YNR076W 363 nt2.13□□□□□ -2.07
TDP1P38319 YCL001W-BYCL001W-B 255 nt2.13□□□□□ -2.07
TDP1P38319 HAL9YOL089C 3093 nt2.13□□□□□ -2.07
TDP1P38319 PIG1YLR273C 1947 nt2.13□□□□□ -2.07
TDP1P38319 NCA2YPR155C 1851 nt2.12□□□□□ -2.07
TDP1P38319 YJL052C-AYJL052C-A 120 nt2.12□□□□□ -2.07
TDP1P38319 YKR075W-AYKR075W-A 270 nt2.12□□□□□ -2.07
TDP1P38319 DGR1YNL130C-A 147 nt2.12□□□□□ -2.07
TDP1P38319 RTT107YHR154W 3213 nt2.12□□□□□ -2.07
TDP1P38319 MMS22YLR320W 4365 nt2.12□□□□□ -2.07
TDP1P38319 SCP160YJL080C 3669 nt2.12□□□□□ -2.07
TDP1P38319 ATG11YPR049C 3537 nt2.11□□□□□ -2.07
TDP1P38319 YCR043CYCR043C 384 nt2.11□□□□□ -2.07
TDP1P38319 YLL019W-AYLL019W-A 93 nt2.11□□□□□ -2.07
TDP1P38319 CDC60YPL160W 3273 nt2.11□□□□□ -2.07
TDP1P38319 PUT3YKL015W 2940 nt2.11□□□□□ -2.07
TDP1P38319 RGA1YOR127W 3024 nt2.1□□□□□ -2.07
TDP1P38319 YDR341CYDR341C 1824 nt2.1□□□□□ -2.07
TDP1P38319 TFB5YDR079C-A 219 nt2.1□□□□□ -2.07
TDP1P38319 YMR326CYMR326C 309 nt2.1□□□□□ -2.07
TDP1P38319 YBR221W-AYBR221W-A 105 nt2.1□□□□□ -2.07
TDP1P38319 RTT101YJL047C 2529 nt2.1□□□□□ -2.07
TDP1P38319 VPS8YAL002W 3825 nt2.09□□□□□ -2.07
TDP1P38319 PAU3YCR104W 375 nt2.09□□□□□ -2.07
TDP1P38319 YJL022WYJL022W 309 nt2.09□□□□□ -2.07
TDP1P38319 YCL046WYCL046W 324 nt2.09□□□□□ -2.07
TDP1P38319 IST2YBR086C 2841 nt2.09□□□□□ -2.07
TDP1P38319 RLM1YPL089C 2031 nt2.08□□□□□ -2.08
TDP1P38319 FIG4YNL325C 2640 nt2.08□□□□□ -2.08
TDP1P38319 YOR343W-BYOR343W-B 5313 nt2.08□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms