Protein–RNA interactions for Protein: P36094

SPC42, Spindle pole body component SPC42, yeastyeast

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC42P36094 YPR002C-AYPR002C-A 198 nt2.52□□□□□ -2.01
SPC42P36094 YBR131C-AYBR131C-A 90 nt2.52□□□□□ -2.01
SPC42P36094 snR52snR52 92 nt2.52□□□□□ -2.01
SPC42P36094 VPS54YDR027C 2670 nt2.51□□□□□ -2.01
SPC42P36094 ARP8YOR141C 2646 nt2.51□□□□□ -2.01
SPC42P36094 snR74snR74 88 nt2.51□□□□□ -2.01
SPC42P36094 SEC31YDL195W 3822 nt2.51□□□□□ -2.01
SPC42P36094 CTR9YOL145C 3234 nt2.51□□□□□ -2.01
SPC42P36094 tW(CCA)G1tW(CCA)G1 72 nt2.5□□□□□ -2.01
SPC42P36094 tW(CCA)G2tW(CCA)G2 72 nt2.5□□□□□ -2.01
SPC42P36094 tW(CCA)JtW(CCA)J 72 nt2.5□□□□□ -2.01
SPC42P36094 tW(CCA)KtW(CCA)K 72 nt2.5□□□□□ -2.01
SPC42P36094 tW(CCA)MtW(CCA)M 72 nt2.5□□□□□ -2.01
SPC42P36094 tW(CCA)PtW(CCA)P 72 nt2.5□□□□□ -2.01
SPC42P36094 YIR030W-AYIR030W-A 384 nt2.5□□□□□ -2.01
SPC42P36094 YLR146W-AYLR146W-A 189 nt2.5□□□□□ -2.01
SPC42P36094 SWI6YLR182W 2412 nt2.5□□□□□ -2.01
SPC42P36094 YHR073W-AYHR073W-A 177 nt2.49□□□□□ -2.01
SPC42P36094 SEC26YDR238C 2922 nt2.48□□□□□ -2.01
SPC42P36094 DCP2YNL118C 2913 nt2.48□□□□□ -2.01
SPC42P36094 YBL053WYBL053W 375 nt2.48□□□□□ -2.01
SPC42P36094 YBL109WYBL109W 336 nt2.48□□□□□ -2.01
SPC42P36094 SPF1YEL031W 3648 nt2.48□□□□□ -2.01
SPC42P36094 SPT21YMR179W 2277 nt2.48□□□□□ -2.01
SPC42P36094 MAK10YEL053C 2202 nt2.48□□□□□ -2.01
SPC42P36094 IRA2YOL081W 9240 nt2.47□□□□□ -2.01
SPC42P36094 MUK1YPL070W 1839 nt2.47□□□□□ -2.01
SPC42P36094 HSL1YKL101W 4557 nt2.47□□□□□ -2.01
SPC42P36094 CFT2YLR115W 2580 nt2.47□□□□□ -2.01
SPC42P36094 VPS13YLL040C 9435 nt2.47□□□□□ -2.01
SPC42P36094 YDL118WYDL118W 381 nt2.47□□□□□ -2.01
SPC42P36094 BNI1YNL271C 5862 nt2.47□□□□□ -2.01
SPC42P36094 VPS34YLR240W 2628 nt2.47□□□□□ -2.01
SPC42P36094 SSQ1YLR369W 1974 nt2.47□□□□□ -2.01
SPC42P36094 SWI5YDR146C 2130 nt2.46□□□□□ -2.02
SPC42P36094 RPL34BYIL052C 366 nt2.46□□□□□ -2.02
SPC42P36094 TMA7YLR262C-A 195 nt2.46□□□□□ -2.02
SPC42P36094 SGF11YPL047W 300 nt2.46□□□□□ -2.02
SPC42P36094 MYO4YAL029C 4416 nt2.45□□□□□ -2.02
SPC42P36094 MSH6YDR097C 3729 nt2.45□□□□□ -2.02
SPC42P36094 EMP24YGL200C 612 nt2.45□□□□□ -2.02
SPC42P36094 YOR161W-BYOR161W-B 261 nt2.45□□□□□ -2.02
SPC42P36094 HMI1YOL095C 2121 nt2.45□□□□□ -2.02
SPC42P36094 NOP53YPL146C 1368 nt2.45□□□□□ -2.02
SPC42P36094 FRK1YPL141C 2598 nt2.44□□□□□ -2.02
SPC42P36094 EFR3YMR212C 2349 nt2.44□□□□□ -2.02
SPC42P36094 YOR055WYOR055W 435 nt2.44□□□□□ -2.02
SPC42P36094 SVL3YPL032C 2478 nt2.44□□□□□ -2.02
SPC42P36094 DNA2YHR164C 4569 nt2.43□□□□□ -2.02
SPC42P36094 PRP42YDR235W 1635 nt2.42□□□□□ -2.02
SPC42P36094 CHC1YGL206C 4962 nt2.42□□□□□ -2.02
SPC42P36094 YOR329W-AYOR329W-A 210 nt2.42□□□□□ -2.02
SPC42P36094 MPT5YGL178W 2580 nt2.42□□□□□ -2.02
SPC42P36094 ULI1YFR026C 510 nt2.41□□□□□ -2.02
SPC42P36094 snR43snR43 209 nt2.41□□□□□ -2.02
SPC42P36094 YLL007CYLL007C 1998 nt2.41□□□□□ -2.02
SPC42P36094 PTP3YER075C 2787 nt2.41□□□□□ -2.02
SPC42P36094 ELG1YOR144C 2376 nt2.41□□□□□ -2.02
SPC42P36094 INP2YMR163C 2118 nt2.4□□□□□ -2.03
SPC42P36094 MSC6YOR354C 2079 nt2.4□□□□□ -2.03
SPC42P36094 ZRG17YNR039C 1818 nt2.4□□□□□ -2.03
SPC42P36094 SLY1YDR189W 2001 nt2.39□□□□□ -2.03
SPC42P36094 RLM1YPL089C 2031 nt2.39□□□□□ -2.03
SPC42P36094 FKS3YMR306W 5358 nt2.39□□□□□ -2.03
SPC42P36094 PAU3YCR104W 375 nt2.39□□□□□ -2.03
SPC42P36094 SNU13YEL026W 381 nt2.39□□□□□ -2.03
SPC42P36094 YHR032W-AYHR032W-A 180 nt2.39□□□□□ -2.03
SPC42P36094 PAU18YLL064C 363 nt2.39□□□□□ -2.03
SPC42P36094 PAU6YNR076W 363 nt2.39□□□□□ -2.03
SPC42P36094 ZIP1YDR285W 2628 nt2.38□□□□□ -2.03
SPC42P36094 PXA2YKL188C 2562 nt2.38□□□□□ -2.03
SPC42P36094 HSH155YMR288W 2916 nt2.38□□□□□ -2.03
SPC42P36094 NEW1YPL226W 3591 nt2.37□□□□□ -2.03
SPC42P36094 PMP1YCR024C-A 123 nt2.37□□□□□ -2.03
SPC42P36094 ECM12YHR021W-A 456 nt2.37□□□□□ -2.03
SPC42P36094 YHR210CYHR210C 1026 nt2.37□□□□□ -2.03
SPC42P36094 YJR039WYJR039W 3366 nt2.36□□□□□ -2.03
SPC42P36094 STE11YLR362W 2154 nt2.36□□□□□ -2.03
SPC42P36094 SEC16YPL085W 6588 nt2.36□□□□□ -2.03
SPC42P36094 KOG1YHR186C 4674 nt2.36□□□□□ -2.03
SPC42P36094 TOR2YKL203C 7425 nt2.36□□□□□ -2.03
SPC42P36094 DNF1YER166W 4716 nt2.35□□□□□ -2.03
SPC42P36094 YEL073CYEL073C 324 nt2.35□□□□□ -2.03
SPC42P36094 YOR218CYOR218C 420 nt2.35□□□□□ -2.03
SPC42P36094 YDR003W-AYDR003W-A 123 nt2.34□□□□□ -2.03
SPC42P36094 RPL33BYOR234C 324 nt2.34□□□□□ -2.03
SPC42P36094 YCL046WYCL046W 324 nt2.34□□□□□ -2.03
SPC42P36094 AGC1YPR021C 2709 nt2.34□□□□□ -2.03
SPC42P36094 PDR3YBL005W 2931 nt2.34□□□□□ -2.04
SPC42P36094 LYS14YDR034C 2373 nt2.34□□□□□ -2.04
SPC42P36094 NOP14YDL148C 2433 nt2.33□□□□□ -2.04
SPC42P36094 STH1YIL126W 4080 nt2.33□□□□□ -2.04
SPC42P36094 MSH5YDL154W 2706 nt2.33□□□□□ -2.04
SPC42P36094 PDR1YGL013C 3207 nt2.33□□□□□ -2.04
SPC42P36094 PUT3YKL015W 2940 nt2.32□□□□□ -2.04
SPC42P36094 snR72snR72 98 nt2.32□□□□□ -2.04
SPC42P36094 YOR345CYOR345C 351 nt2.32□□□□□ -2.04
SPC42P36094 RFX1YLR176C 2436 nt2.32□□□□□ -2.04
SPC42P36094 YFR016CYFR016C 3702 nt2.32□□□□□ -2.04
SPC42P36094 MLH3YPL164C 2148 nt2.31□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms