Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC6A4P31645 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SLC6A4P31645 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC6A4P31645 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SLC6A4P31645 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC6A4P31645 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SLC6A4P31645 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SLC6A4P31645 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.69■□□□□ 0.9
SLC6A4P31645 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A4P31645 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A4P31645 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A4P31645 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC6A4P31645 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC6A4P31645 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SLC6A4P31645 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SLC6A4P31645 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 GCSHP5-201ENST00000443090 522 ntBASIC20.68■□□□□ 0.9
SLC6A4P31645 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC6A4P31645 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC6A4P31645 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC6A4P31645 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 AC124283.5-201ENST00000624661 1809 ntBASIC20.68■□□□□ 0.9
SLC6A4P31645 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC6A4P31645 AC073314.1-201ENST00000568729 2216 ntBASIC20.68■□□□□ 0.9
SLC6A4P31645 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SLC6A4P31645 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC6A4P31645 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SLC6A4P31645 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC6A4P31645 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.67■□□□□ 0.9
SLC6A4P31645 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC6A4P31645 AL031963.3-201ENST00000606441 850 ntBASIC20.67■□□□□ 0.9
SLC6A4P31645 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC6A4P31645 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 SMG8-203ENST00000578922 2178 ntBASIC20.66■□□□□ 0.9
SLC6A4P31645 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SLC6A4P31645 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SLC6A4P31645 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.66■□□□□ 0.9
SLC6A4P31645 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A4P31645 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SLC6A4P31645 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.66■□□□□ 0.9
SLC6A4P31645 AC142381.4-202ENST00000563973 229 ntBASIC20.66■□□□□ 0.9
SLC6A4P31645 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A4P31645 RN7SL471P-201ENST00000580476 299 ntBASIC20.66■□□□□ 0.9
SLC6A4P31645 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.66■□□□□ 0.9
SLC6A4P31645 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A4P31645 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SLC6A4P31645 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SLC6A4P31645 KRT8P17-201ENST00000453110 1448 ntBASIC20.66■□□□□ 0.9
SLC6A4P31645 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC6A4P31645 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC6A4P31645 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLC6A4P31645 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLC6A4P31645 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A4P31645 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.65■□□□□ 0.9
SLC6A4P31645 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A4P31645 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.65■□□□□ 0.9
SLC6A4P31645 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 KRT8P20-201ENST00000423953 1409 ntBASIC20.65■□□□□ 0.9
SLC6A4P31645 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SLC6A4P31645 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SLC6A4P31645 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.65■□□□□ 0.9
SLC6A4P31645 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SLC6A4P31645 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms