Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP24386 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP24386 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP24386 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 AC069236.1-201ENST00000604339 616 ntBASIC18.77■□□□□ 0.6
CHMP24386 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CHMP24386 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP24386 OR10C1-204ENST00000622521 1039 ntBASIC18.77■□□□□ 0.6
CHMP24386 AC008694.1-202ENST00000636953 945 ntBASIC18.77■□□□□ 0.6
CHMP24386 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CHMP24386 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP24386 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP24386 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP24386 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP24386 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CHMP24386 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CHMP24386 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHMP24386 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CHMP24386 AC091799.1-201ENST00000422823 811 ntBASIC18.76■□□□□ 0.59
CHMP24386 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP24386 CYP2T1P-201ENST00000432607 1285 ntBASIC18.76■□□□□ 0.59
CHMP24386 AC083906.2-201ENST00000511578 360 ntBASIC18.76■□□□□ 0.59
CHMP24386 AC104771.1-201ENST00000603335 964 ntBASIC18.76■□□□□ 0.59
CHMP24386 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.76■□□□□ 0.59
CHMP24386 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CHMP24386 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP24386 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CHMP24386 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CHMP24386 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.76■□□□□ 0.59
CHMP24386 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CHMP24386 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CHMP24386 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.75■□□□□ 0.59
CHMP24386 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP24386 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP24386 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CHMP24386 AF201337.1-201ENST00000520239 748 ntBASIC18.75■□□□□ 0.59
CHMP24386 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP24386 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.75■□□□□ 0.59
CHMP24386 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CHMP24386 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP24386 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP24386 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CHMP24386 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP24386 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP24386 AL512625.2-201ENST00000417533 625 ntBASIC18.74■□□□□ 0.59
CHMP24386 CDV3P1-201ENST00000471403 739 ntBASIC18.74■□□□□ 0.59
CHMP24386 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP24386 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CHMP24386 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.74■□□□□ 0.59
CHMP24386 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CHMP24386 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CHMP24386 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP24386 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CHMP24386 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CHMP24386 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP24386 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.73■□□□□ 0.59
CHMP24386 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.73■□□□□ 0.59
CHMP24386 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.73■□□□□ 0.59
CHMP24386 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHMP24386 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP24386 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
CHMP24386 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CHMP24386 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms