Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 GABARAPL3-202ENST00000624044 1851 ntBASIC19.1■□□□□ 0.65
MMP11P24347 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
MMP11P24347 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP11P24347 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.1■□□□□ 0.65
MMP11P24347 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
MMP11P24347 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.1■□□□□ 0.65
MMP11P24347 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.1■□□□□ 0.65
MMP11P24347 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.1■□□□□ 0.65
MMP11P24347 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
MMP11P24347 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
MMP11P24347 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
MMP11P24347 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
MMP11P24347 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
MMP11P24347 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.09■□□□□ 0.65
MMP11P24347 RPS2P52-201ENST00000469610 820 ntBASIC19.09■□□□□ 0.65
MMP11P24347 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.09■□□□□ 0.65
MMP11P24347 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.09■□□□□ 0.65
MMP11P24347 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
MMP11P24347 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
MMP11P24347 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.09■□□□□ 0.65
MMP11P24347 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MMP11P24347 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MMP11P24347 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP11P24347 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MMP11P24347 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
MMP11P24347 AC011484.1-201ENST00000377652 1995 ntBASIC19.08■□□□□ 0.65
MMP11P24347 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
MMP11P24347 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
MMP11P24347 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
MMP11P24347 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.08■□□□□ 0.64
MMP11P24347 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
MMP11P24347 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP11P24347 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP11P24347 AC093827.2-201ENST00000512654 315 ntBASIC19.08■□□□□ 0.64
MMP11P24347 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.08■□□□□ 0.64
MMP11P24347 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP11P24347 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP11P24347 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
MMP11P24347 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.08■□□□□ 0.64
MMP11P24347 AL356652.1-201ENST00000615962 565 ntBASIC19.08■□□□□ 0.64
MMP11P24347 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
MMP11P24347 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP11P24347 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
MMP11P24347 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.08■□□□□ 0.64
MMP11P24347 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MMP11P24347 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MMP11P24347 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.07■□□□□ 0.64
MMP11P24347 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
MMP11P24347 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
MMP11P24347 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.07■□□□□ 0.64
MMP11P24347 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.07■□□□□ 0.64
MMP11P24347 AC142381.4-202ENST00000563973 229 ntBASIC19.07■□□□□ 0.64
MMP11P24347 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.07■□□□□ 0.64
MMP11P24347 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.07■□□□□ 0.64
MMP11P24347 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.07■□□□□ 0.64
MMP11P24347 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.07■□□□□ 0.64
MMP11P24347 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MMP11P24347 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms