Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MMP8P22894 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.21■□□□□ 0.99
MMP8P22894 AL691432.2-201ENST00000607222 2038 ntBASIC21.21■□□□□ 0.99
MMP8P22894 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
MMP8P22894 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MMP8P22894 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP8P22894 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.2■□□□□ 0.98
MMP8P22894 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MMP8P22894 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.2■□□□□ 0.98
MMP8P22894 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.2■□□□□ 0.98
MMP8P22894 LSM12P1-201ENST00000411836 588 ntBASIC21.2■□□□□ 0.98
MMP8P22894 BX276092.2-201ENST00000417668 665 ntBASIC21.2■□□□□ 0.98
MMP8P22894 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.2■□□□□ 0.98
MMP8P22894 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MMP8P22894 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.2■□□□□ 0.98
MMP8P22894 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP8P22894 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.2■□□□□ 0.98
MMP8P22894 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MMP8P22894 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
MMP8P22894 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MMP8P22894 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.19■□□□□ 0.98
MMP8P22894 NCF1B-203ENST00000435988 1254 ntBASIC21.19■□□□□ 0.98
MMP8P22894 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP8P22894 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.19■□□□□ 0.98
MMP8P22894 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
MMP8P22894 KRT8P17-201ENST00000453110 1448 ntBASIC21.19■□□□□ 0.98
MMP8P22894 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MMP8P22894 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.18■□□□□ 0.98
MMP8P22894 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
MMP8P22894 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 GUSBP6-202ENST00000438529 1198 ntBASIC21.18■□□□□ 0.98
MMP8P22894 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.18■□□□□ 0.98
MMP8P22894 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.18■□□□□ 0.98
MMP8P22894 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 AFG3L1P-217ENST00000557444 2447 ntBASIC21.18■□□□□ 0.98
MMP8P22894 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MMP8P22894 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
MMP8P22894 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MMP8P22894 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 MIPEPP3-201ENST00000412105 444 ntBASIC21.17■□□□□ 0.98
MMP8P22894 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.17■□□□□ 0.98
MMP8P22894 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
MMP8P22894 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 AL031963.3-201ENST00000606441 850 ntBASIC21.17■□□□□ 0.98
MMP8P22894 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.17■□□□□ 0.98
MMP8P22894 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP8P22894 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.17■□□□□ 0.98
MMP8P22894 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MMP8P22894 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
MMP8P22894 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.16■□□□□ 0.98
MMP8P22894 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP8P22894 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP8P22894 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
MMP8P22894 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP8P22894 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP8P22894 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MMP8P22894 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.16■□□□□ 0.98
MMP8P22894 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.16■□□□□ 0.98
MMP8P22894 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.16■□□□□ 0.98
MMP8P22894 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
MMP8P22894 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MMP8P22894 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 KRT8P20-201ENST00000423953 1409 ntBASIC21.15■□□□□ 0.98
MMP8P22894 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MMP8P22894 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MMP8P22894 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP8P22894 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.15■□□□□ 0.98
MMP8P22894 TSPY6P-201ENST00000448518 926 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms