Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NR4A1P22736 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NR4A1P22736 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NR4A1P22736 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.6■□□□□ 0.57
NR4A1P22736 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NR4A1P22736 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.6■□□□□ 0.57
NR4A1P22736 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
NR4A1P22736 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.6■□□□□ 0.57
NR4A1P22736 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
NR4A1P22736 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
NR4A1P22736 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.6■□□□□ 0.57
NR4A1P22736 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
NR4A1P22736 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.6■□□□□ 0.57
NR4A1P22736 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.6■□□□□ 0.57
NR4A1P22736 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NR4A1P22736 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
NR4A1P22736 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 TCF3P1-201ENST00000423021 1937 ntBASIC18.59■□□□□ 0.57
NR4A1P22736 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NR4A1P22736 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.59■□□□□ 0.57
NR4A1P22736 CCDC92B-201ENST00000575506 885 ntBASIC18.59■□□□□ 0.57
NR4A1P22736 TERF1P2-201ENST00000583350 1212 ntBASIC18.59■□□□□ 0.57
NR4A1P22736 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.59■□□□□ 0.57
NR4A1P22736 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NR4A1P22736 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NR4A1P22736 AC009237.3-201ENST00000393279 1427 ntBASIC18.58■□□□□ 0.57
NR4A1P22736 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR4A1P22736 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NR4A1P22736 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.58■□□□□ 0.57
NR4A1P22736 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NR4A1P22736 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 KRT18P14-201ENST00000534205 1250 ntBASIC18.58■□□□□ 0.56
NR4A1P22736 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.58■□□□□ 0.56
NR4A1P22736 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.58■□□□□ 0.56
NR4A1P22736 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.58■□□□□ 0.56
NR4A1P22736 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.58■□□□□ 0.56
NR4A1P22736 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
NR4A1P22736 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NR4A1P22736 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.57■□□□□ 0.56
NR4A1P22736 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.57■□□□□ 0.56
NR4A1P22736 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.57■□□□□ 0.56
NR4A1P22736 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.57■□□□□ 0.56
NR4A1P22736 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.57■□□□□ 0.56
NR4A1P22736 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.57■□□□□ 0.56
NR4A1P22736 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 AL034346.1-201ENST00000568244 1277 ntBASIC18.57■□□□□ 0.56
NR4A1P22736 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.57■□□□□ 0.56
NR4A1P22736 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NR4A1P22736 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
NR4A1P22736 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NR4A1P22736 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NR4A1P22736 AP004607.7-201ENST00000527152 1677 ntBASIC18.57■□□□□ 0.56
NR4A1P22736 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms