Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.05■■□□□ 1.28
COL11A1P12107 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.05■■□□□ 1.28
COL11A1P12107 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
COL11A1P12107 AP001412.1-201ENST00000608405 714 ntBASIC23.05■■□□□ 1.28
COL11A1P12107 AC012306.2-201ENST00000609350 630 ntBASIC23.05■■□□□ 1.28
COL11A1P12107 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.05■■□□□ 1.28
COL11A1P12107 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 AC121338.2-201ENST00000622535 1744 ntBASIC23.05■■□□□ 1.28
COL11A1P12107 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL11A1P12107 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.05■■□□□ 1.28
COL11A1P12107 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
COL11A1P12107 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A1P12107 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.04■■□□□ 1.28
COL11A1P12107 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A1P12107 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.04■■□□□ 1.28
COL11A1P12107 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.04■■□□□ 1.28
COL11A1P12107 AF186192.3-201ENST00000583427 947 ntBASIC23.04■■□□□ 1.28
COL11A1P12107 REXO1L10P-201ENST00000615707 1290 ntBASIC23.04■■□□□ 1.28
COL11A1P12107 REXO1L12P-201ENST00000622156 912 ntBASIC23.04■■□□□ 1.28
COL11A1P12107 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL11A1P12107 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A1P12107 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A1P12107 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.04■■□□□ 1.28
COL11A1P12107 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.04■■□□□ 1.28
COL11A1P12107 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A1P12107 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL11A1P12107 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC23.04■■□□□ 1.28
COL11A1P12107 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 KRT8P9-201ENST00000558927 1449 ntBASIC23.03■■□□□ 1.28
COL11A1P12107 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A1P12107 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC23.03■■□□□ 1.28
COL11A1P12107 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.03■■□□□ 1.28
COL11A1P12107 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 SRI-203ENST00000419179 1307 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A1P12107 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 PLK5-205ENST00000642079 1969 ntBASIC23.03■■□□□ 1.28
COL11A1P12107 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
COL11A1P12107 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
COL11A1P12107 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A1P12107 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.03■■□□□ 1.28
COL11A1P12107 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.03■■□□□ 1.28
COL11A1P12107 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC23.03■■□□□ 1.28
COL11A1P12107 CD177P1-201ENST00000606252 935 ntBASIC23.03■■□□□ 1.28
COL11A1P12107 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
COL11A1P12107 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.03■■□□□ 1.28
COL11A1P12107 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.03■■□□□ 1.28
COL11A1P12107 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL11A1P12107 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.02■■□□□ 1.28
COL11A1P12107 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A1P12107 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A1P12107 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.02■■□□□ 1.28
COL11A1P12107 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A1P12107 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.02■■□□□ 1.28
COL11A1P12107 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.02■■□□□ 1.28
COL11A1P12107 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.02■■□□□ 1.28
COL11A1P12107 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A1P12107 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL11A1P12107 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COL11A1P12107 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.02■■□□□ 1.28
COL11A1P12107 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
COL11A1P12107 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.01■■□□□ 1.27
COL11A1P12107 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 AC006128.1-201ENST00000624704 1661 ntBASIC23.01■■□□□ 1.27
COL11A1P12107 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 AC005229.4-201ENST00000610085 2198 ntBASIC23.01■■□□□ 1.27
COL11A1P12107 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC23.01■■□□□ 1.27
COL11A1P12107 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC23.01■■□□□ 1.27
COL11A1P12107 AP003071.4-201ENST00000562276 1284 ntBASIC23.01■■□□□ 1.27
COL11A1P12107 RN7SL850P-201ENST00000579959 291 ntBASIC23.01■■□□□ 1.27
COL11A1P12107 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.01■■□□□ 1.27
COL11A1P12107 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
COL11A1P12107 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A1P12107 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23■■□□□ 1.27
COL11A1P12107 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC23■■□□□ 1.27
COL11A1P12107 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
COL11A1P12107 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
COL11A1P12107 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms