Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RETP07949 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RETP07949 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.32■□□□□ 0.84
RETP07949 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RETP07949 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.32■□□□□ 0.84
RETP07949 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.32■□□□□ 0.84
RETP07949 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.32■□□□□ 0.84
RETP07949 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.32■□□□□ 0.84
RETP07949 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RETP07949 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
RETP07949 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.31■□□□□ 0.84
RETP07949 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.31■□□□□ 0.84
RETP07949 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.31■□□□□ 0.84
RETP07949 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.31■□□□□ 0.84
RETP07949 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RETP07949 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.31■□□□□ 0.84
RETP07949 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.31■□□□□ 0.84
RETP07949 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RETP07949 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETP07949 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.31■□□□□ 0.84
RETP07949 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.31■□□□□ 0.84
RETP07949 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.31■□□□□ 0.84
RETP07949 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RETP07949 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.31■□□□□ 0.84
RETP07949 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.31■□□□□ 0.84
RETP07949 MIR6786-201ENST00000616843 113 ntBASIC20.31■□□□□ 0.84
RETP07949 AC006557.6-201ENST00000623071 864 ntBASIC20.31■□□□□ 0.84
RETP07949 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETP07949 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.31■□□□□ 0.84
RETP07949 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RETP07949 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.3■□□□□ 0.84
RETP07949 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.3■□□□□ 0.84
RETP07949 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.3■□□□□ 0.84
RETP07949 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.3■□□□□ 0.84
RETP07949 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.3■□□□□ 0.84
RETP07949 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.3■□□□□ 0.84
RETP07949 Z98882.1-201ENST00000622160 2253 ntBASIC20.3■□□□□ 0.84
RETP07949 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RETP07949 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.29■□□□□ 0.84
RETP07949 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
RETP07949 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RETP07949 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETP07949 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETP07949 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETP07949 AC005521.1-201ENST00000393351 872 ntBASIC20.29■□□□□ 0.84
RETP07949 AL390719.1-204ENST00000412397 1219 ntBASIC20.29■□□□□ 0.84
RETP07949 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.29■□□□□ 0.84
RETP07949 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.29■□□□□ 0.84
RETP07949 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.29■□□□□ 0.84
RETP07949 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RETP07949 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETP07949 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.29■□□□□ 0.84
RETP07949 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETP07949 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RETP07949 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.29■□□□□ 0.84
RETP07949 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.28■□□□□ 0.84
RETP07949 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 SLC25A24-204ENST00000569674 2357 ntBASIC20.28■□□□□ 0.84
RETP07949 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.28■□□□□ 0.84
RETP07949 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.28■□□□□ 0.84
RETP07949 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.28■□□□□ 0.84
RETP07949 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.28■□□□□ 0.84
RETP07949 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.28■□□□□ 0.84
RETP07949 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.28■□□□□ 0.84
RETP07949 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.28■□□□□ 0.84
RETP07949 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.28■□□□□ 0.84
RETP07949 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETP07949 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.27■□□□□ 0.84
RETP07949 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RETP07949 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.27■□□□□ 0.84
RETP07949 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.27■□□□□ 0.84
RETP07949 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RETP07949 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETP07949 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETP07949 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
RETP07949 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms