Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.39■■□□□ 1.01
RB1P06400 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RB1P06400 AL390955.1-201ENST00000428694 934 ntBASIC21.39■■□□□ 1.01
RB1P06400 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.39■■□□□ 1.01
RB1P06400 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.39■■□□□ 1.01
RB1P06400 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.39■■□□□ 1.01
RB1P06400 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.39■■□□□ 1.01
RB1P06400 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.39■■□□□ 1.01
RB1P06400 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.39■■□□□ 1.01
RB1P06400 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.39■■□□□ 1.01
RB1P06400 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.39■■□□□ 1.01
RB1P06400 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
RB1P06400 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RB1P06400 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RB1P06400 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.38■■□□□ 1.01
RB1P06400 DUX4L26-201ENST00000489078 1255 ntBASIC21.38■■□□□ 1.01
RB1P06400 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
RB1P06400 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RB1P06400 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
RB1P06400 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.38■■□□□ 1.01
RB1P06400 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.38■■□□□ 1.01
RB1P06400 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RB1P06400 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.38■■□□□ 1.01
RB1P06400 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RB1P06400 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RB1P06400 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
RB1P06400 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RB1P06400 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.37■■□□□ 1.01
RB1P06400 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
RB1P06400 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RB1P06400 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RB1P06400 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RB1P06400 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.37■■□□□ 1.01
RB1P06400 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.37■■□□□ 1.01
RB1P06400 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.37■■□□□ 1.01
RB1P06400 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
RB1P06400 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RB1P06400 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RB1P06400 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.36■■□□□ 1.01
RB1P06400 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RB1P06400 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RB1P06400 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RB1P06400 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.36■■□□□ 1.01
RB1P06400 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.36■■□□□ 1.01
RB1P06400 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.36■■□□□ 1.01
RB1P06400 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
RB1P06400 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RB1P06400 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.36■■□□□ 1.01
RB1P06400 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RB1P06400 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.36■■□□□ 1.01
RB1P06400 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RB1P06400 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.36■■□□□ 1.01
RB1P06400 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RB1P06400 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RB1P06400 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RB1P06400 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RB1P06400 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RB1P06400 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RB1P06400 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
RB1P06400 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.35■■□□□ 1.01
RB1P06400 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
RB1P06400 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.35■■□□□ 1.01
RB1P06400 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.35■■□□□ 1.01
RB1P06400 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.35■■□□□ 1.01
RB1P06400 AC104076.2-201ENST00000448912 469 ntBASIC21.35■■□□□ 1.01
RB1P06400 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.35■■□□□ 1.01
RB1P06400 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 NTF6B-201ENST00000591913 560 ntBASIC21.35■■□□□ 1.01
RB1P06400 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.35■■□□□ 1.01
RB1P06400 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.35■■□□□ 1.01
RB1P06400 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.35■■□□□ 1.01
RB1P06400 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RB1P06400 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.35■■□□□ 1.01
RB1P06400 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RB1P06400 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.35■■□□□ 1.01
RB1P06400 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.34■■□□□ 1.01
RB1P06400 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RB1P06400 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.34■■□□□ 1.01
RB1P06400 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms