Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 YCK3YER123W 1575 nt2.19□□□□□ -2.06
CDC9P04819 ENV11YGR071C 2583 nt2.18□□□□□ -2.06
CDC9P04819 DGR2YKL121W 2559 nt2.18□□□□□ -2.06
CDC9P04819 FRK1YPL141C 2598 nt2.18□□□□□ -2.06
CDC9P04819 APL2YKL135C 2181 nt2.18□□□□□ -2.06
CDC9P04819 PUT3YKL015W 2940 nt2.18□□□□□ -2.06
CDC9P04819 MPT5YGL178W 2580 nt2.17□□□□□ -2.06
CDC9P04819 YCR018C-AYCR018C-A 255 nt2.17□□□□□ -2.06
CDC9P04819 YDL118WYDL118W 381 nt2.17□□□□□ -2.06
CDC9P04819 GPG1YGL121C 381 nt2.17□□□□□ -2.06
CDC9P04819 YIL156W-BYIL156W-B 222 nt2.17□□□□□ -2.06
CDC9P04819 YMR321CYMR321C 318 nt2.17□□□□□ -2.06
CDC9P04819 VPS54YDR027C 2670 nt2.17□□□□□ -2.06
CDC9P04819 SEC63YOR254C 1992 nt2.16□□□□□ -2.06
CDC9P04819 PAU2YEL049W 363 nt2.16□□□□□ -2.06
CDC9P04819 YIR044CYIR044C 186 nt2.16□□□□□ -2.06
CDC9P04819 YOR218CYOR218C 420 nt2.16□□□□□ -2.06
CDC9P04819 RAD34YDR314C 2079 nt2.16□□□□□ -2.06
CDC9P04819 NUP170YBL079W 4509 nt2.15□□□□□ -2.06
CDC9P04819 MAD1YGL086W 2250 nt2.15□□□□□ -2.06
CDC9P04819 YHR180W-AYHR180W-A 183 nt2.15□□□□□ -2.07
CDC9P04819 ATP7YKL016C 525 nt2.15□□□□□ -2.07
CDC9P04819 YOR015WYOR015W 360 nt2.15□□□□□ -2.07
CDC9P04819 IES4YOR189W 351 nt2.15□□□□□ -2.07
CDC9P04819 ATG11YPR049C 3537 nt2.15□□□□□ -2.07
CDC9P04819 RPS27BYHR021C 249 nt2.14□□□□□ -2.07
CDC9P04819 APQ12YIL040W 417 nt2.14□□□□□ -2.07
CDC9P04819 RPL34BYIL052C 366 nt2.14□□□□□ -2.07
CDC9P04819 YKL165C-AYKL165C-A 234 nt2.14□□□□□ -2.07
CDC9P04819 PIG1YLR273C 1947 nt2.14□□□□□ -2.07
CDC9P04819 VPS13YLL040C 9435 nt2.13□□□□□ -2.07
CDC9P04819 MSH6YDR097C 3729 nt2.13□□□□□ -2.07
CDC9P04819 DNF1YER166W 4716 nt2.12□□□□□ -2.07
CDC9P04819 tF(GAA)QtF(GAA)Q 75 nt2.12□□□□□ -2.07
CDC9P04819 MSB1YOR188W 3414 nt2.11□□□□□ -2.07
CDC9P04819 YOR343W-BYOR343W-B 5313 nt2.11□□□□□ -2.07
CDC9P04819 YDR182W-AYDR182W-A 204 nt2.11□□□□□ -2.07
CDC9P04819 RRT15YLR162W-A 189 nt2.11□□□□□ -2.07
CDC9P04819 NPR2YEL062W 1848 nt2.11□□□□□ -2.07
CDC9P04819 ATG9YDL149W 2994 nt2.11□□□□□ -2.07
CDC9P04819 TOF1YNL273W 3717 nt2.11□□□□□ -2.07
CDC9P04819 IRC8YJL051W 2469 nt2.1□□□□□ -2.07
CDC9P04819 YPR092WYPR092W 306 nt2.1□□□□□ -2.07
CDC9P04819 CUL3YGR003W 2235 nt2.1□□□□□ -2.07
CDC9P04819 SPO75YLL005C 2607 nt2.09□□□□□ -2.07
CDC9P04819 PFD1YJL179W 330 nt2.09□□□□□ -2.07
CDC9P04819 PTP2YOR208W 2253 nt2.08□□□□□ -2.08
CDC9P04819 RGA1YOR127W 3024 nt2.08□□□□□ -2.08
CDC9P04819 SCD5YOR329C 2619 nt2.08□□□□□ -2.08
CDC9P04819 NOC3YLR002C 1992 nt2.08□□□□□ -2.08
CDC9P04819 HIR3YJR140C 4947 nt2.08□□□□□ -2.08
CDC9P04819 MYO4YAL029C 4416 nt2.07□□□□□ -2.08
CDC9P04819 BNI1YNL271C 5862 nt2.07□□□□□ -2.08
CDC9P04819 VPS55YJR044C 423 nt2.07□□□□□ -2.08
CDC9P04819 PDR8YLR266C 2106 nt2.07□□□□□ -2.08
CDC9P04819 YOR011W-AYOR011W-A 207 nt2.07□□□□□ -2.08
CDC9P04819 MCM10YIL150C 1716 nt2.07□□□□□ -2.08
CDC9P04819 SFB2YNL049C 2631 nt2.07□□□□□ -2.08
CDC9P04819 HSL1YKL101W 4557 nt2.07□□□□□ -2.08
CDC9P04819 KOG1YHR186C 4674 nt2.07□□□□□ -2.08
CDC9P04819 AI5_ALPHAQ0070 1893 nt2.07□□□□□ -2.08
CDC9P04819 ELG1YOR144C 2376 nt2.07□□□□□ -2.08
CDC9P04819 YLR035C-AYLR035C-A 3468 nt2.07□□□□□ -2.08
CDC9P04819 YOL098CYOL098C 3114 nt2.06□□□□□ -2.08
CDC9P04819 MGA2YIR033W 3342 nt2.06□□□□□ -2.08
CDC9P04819 YNL144CYNL144C 2223 nt2.06□□□□□ -2.08
CDC9P04819 SEC5YDR166C 2916 nt2.06□□□□□ -2.08
CDC9P04819 RPS25BYLR333C 327 nt2.06□□□□□ -2.08
CDC9P04819 UTP21YLR409C 2820 nt2.06□□□□□ -2.08
CDC9P04819 SEC31YDL195W 3822 nt2.05□□□□□ -2.08
CDC9P04819 TFC3YAL001C 3483 nt2.04□□□□□ -2.08
CDC9P04819 YJL120WYJL120W 324 nt2.04□□□□□ -2.08
CDC9P04819 YOR302WYOR302W 78 nt2.04□□□□□ -2.08
CDC9P04819 STH1YIL126W 4080 nt2.04□□□□□ -2.08
CDC9P04819 YLL007CYLL007C 1998 nt2.03□□□□□ -2.08
CDC9P04819 SPO21YOL091W 1830 nt2.03□□□□□ -2.08
CDC9P04819 Q0032Q0032 291 nt2.03□□□□□ -2.08
CDC9P04819 PAM16YJL104W 450 nt2.03□□□□□ -2.08
CDC9P04819 YMR175W-AYMR175W-A 195 nt2.03□□□□□ -2.08
CDC9P04819 YBR182C-AYBR182C-A 195 nt2.03□□□□□ -2.08
CDC9P04819 YBR174CYBR174C 315 nt2.02□□□□□ -2.09
CDC9P04819 YKU70YMR284W 1809 nt2.02□□□□□ -2.09
CDC9P04819 RPL31AYDL075W 342 nt2.01□□□□□ -2.09
CDC9P04819 YOR225WYOR225W 330 nt2.01□□□□□ -2.09
CDC9P04819 SGF11YPL047W 300 nt2.01□□□□□ -2.09
CDC9P04819 SLI15YBR156C 2097 nt2.01□□□□□ -2.09
CDC9P04819 TOR2YKL203C 7425 nt2.01□□□□□ -2.09
CDC9P04819 SEC16YPL085W 6588 nt2.01□□□□□ -2.09
CDC9P04819 PAU3YCR104W 375 nt2□□□□□ -2.09
CDC9P04819 OLI1Q0130 231 nt2□□□□□ -2.09
CDC9P04819 YJR039WYJR039W 3366 nt2□□□□□ -2.09
CDC9P04819 YDL185C-AYDL185C-A 228 nt1.99□□□□□ -2.09
CDC9P04819 ISD11YER048W-A 285 nt1.99□□□□□ -2.09
CDC9P04819 TMA7YLR262C-A 195 nt1.99□□□□□ -2.09
CDC9P04819 YEL014CYEL014C 306 nt1.98□□□□□ -2.09
CDC9P04819 YGL007C-AYGL007C-A 87 nt1.98□□□□□ -2.09
CDC9P04819 YIR030W-AYIR030W-A 384 nt1.98□□□□□ -2.09
CDC9P04819 YOR072W-BYOR072W-B 162 nt1.98□□□□□ -2.09
CDC9P04819 YOR376WYOR376W 369 nt1.98□□□□□ -2.09
CDC9P04819 PKH2YOL100W 3246 nt1.97□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 315.9 ms