Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.29■□□□□ 0.04
TCRAP04437 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
TCRAP04437 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRAP04437 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.29■□□□□ 0.04
TCRAP04437 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRAP04437 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TCRAP04437 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TCRAP04437 TREX1-205ENST00000625293 1783 ntBASIC15.29■□□□□ 0.04
TCRAP04437 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRAP04437 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRAP04437 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 KRT87P-202ENST00000534226 1464 ntBASIC15.28■□□□□ 0.04
TCRAP04437 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRAP04437 KRT8P36-201ENST00000489121 1440 ntBASIC15.28■□□□□ 0.04
TCRAP04437 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.28■□□□□ 0.04
TCRAP04437 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TCRAP04437 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TCRAP04437 AC012414.1-201ENST00000556676 535 ntBASIC15.28■□□□□ 0.04
TCRAP04437 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRAP04437 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRAP04437 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRAP04437 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TCRAP04437 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TCRAP04437 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TCRAP04437 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TCRAP04437 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TCRAP04437 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRAP04437 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TCRAP04437 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRAP04437 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.27■□□□□ 0.04
TCRAP04437 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRAP04437 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRAP04437 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TCRAP04437 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRAP04437 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TCRAP04437 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
TCRAP04437 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.27■□□□□ 0.04
TCRAP04437 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.27■□□□□ 0.04
TCRAP04437 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TCRAP04437 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRAP04437 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TCRAP04437 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TCRAP04437 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.27■□□□□ 0.03
TCRAP04437 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRAP04437 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TCRAP04437 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TCRAP04437 AC120498.9-201ENST00000339021 3867 ntBASIC15.26■□□□□ 0.03
TCRAP04437 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TCRAP04437 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TCRAP04437 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRAP04437 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.26■□□□□ 0.03
TCRAP04437 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRAP04437 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.26■□□□□ 0.03
TCRAP04437 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TCRAP04437 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.26■□□□□ 0.03
TCRAP04437 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC15.26■□□□□ 0.03
TCRAP04437 AC138907.5-202ENST00000569484 235 ntBASIC15.26■□□□□ 0.03
TCRAP04437 TPRG1LP1-201ENST00000598702 760 ntBASIC15.26■□□□□ 0.03
TCRAP04437 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TCRAP04437 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TCRAP04437 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TCRAP04437 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRAP04437 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TCRAP04437 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRAP04437 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms