Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.8■□□□□ 0.28
GAPDHP04406 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
GAPDHP04406 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GAPDHP04406 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.8■□□□□ 0.28
GAPDHP04406 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.8■□□□□ 0.28
GAPDHP04406 AC243732.1-201ENST00000612648 864 ntBASIC16.8■□□□□ 0.28
GAPDHP04406 RARRES2P11-201ENST00000635158 484 ntBASIC16.8■□□□□ 0.28
GAPDHP04406 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
GAPDHP04406 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
GAPDHP04406 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.8■□□□□ 0.28
GAPDHP04406 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GAPDHP04406 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.79■□□□□ 0.28
GAPDHP04406 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
GAPDHP04406 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.79■□□□□ 0.28
GAPDHP04406 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
GAPDHP04406 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.79■□□□□ 0.28
GAPDHP04406 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.79■□□□□ 0.28
GAPDHP04406 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.79■□□□□ 0.28
GAPDHP04406 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.79■□□□□ 0.28
GAPDHP04406 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.79■□□□□ 0.28
GAPDHP04406 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
GAPDHP04406 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.79■□□□□ 0.28
GAPDHP04406 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GAPDHP04406 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
GAPDHP04406 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
GAPDHP04406 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 AP000974.1-201ENST00000623909 2387 ntBASIC16.79■□□□□ 0.28
GAPDHP04406 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GAPDHP04406 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
GAPDHP04406 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GAPDHP04406 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
GAPDHP04406 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.78■□□□□ 0.28
GAPDHP04406 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.78■□□□□ 0.28
GAPDHP04406 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.78■□□□□ 0.28
GAPDHP04406 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.78■□□□□ 0.28
GAPDHP04406 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 RBM17P2-201ENST00000616397 1405 ntBASIC16.78■□□□□ 0.28
GAPDHP04406 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GAPDHP04406 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.78■□□□□ 0.28
GAPDHP04406 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
GAPDHP04406 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GAPDHP04406 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.77■□□□□ 0.28
GAPDHP04406 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GAPDHP04406 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
GAPDHP04406 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.77■□□□□ 0.28
GAPDHP04406 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
GAPDHP04406 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GAPDHP04406 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
GAPDHP04406 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.77■□□□□ 0.28
GAPDHP04406 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.77■□□□□ 0.28
GAPDHP04406 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.77■□□□□ 0.28
GAPDHP04406 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
GAPDHP04406 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
GAPDHP04406 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.77■□□□□ 0.28
GAPDHP04406 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.77■□□□□ 0.28
GAPDHP04406 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GAPDHP04406 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
GAPDHP04406 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
GAPDHP04406 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GAPDHP04406 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.76■□□□□ 0.27
GAPDHP04406 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GAPDHP04406 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
GAPDHP04406 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAPDHP04406 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAPDHP04406 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
GAPDHP04406 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAPDHP04406 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
GAPDHP04406 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms