Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD3DP04234 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD3DP04234 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD3DP04234 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.05■□□□□ 0.32
CD3DP04234 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD3DP04234 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 AC026471.1-201ENST00000564629 3026 ntBASIC17.04■□□□□ 0.32
CD3DP04234 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD3DP04234 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.04■□□□□ 0.32
CD3DP04234 RARRES2P11-201ENST00000635158 484 ntBASIC17.04■□□□□ 0.32
CD3DP04234 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
CD3DP04234 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.04■□□□□ 0.32
CD3DP04234 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.04■□□□□ 0.32
CD3DP04234 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD3DP04234 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 BX119927.1-201ENST00000636596 1552 ntBASIC17.03■□□□□ 0.32
CD3DP04234 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CD3DP04234 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.03■□□□□ 0.32
CD3DP04234 IGHV3-19-201ENST00000521488 291 ntBASIC17.03■□□□□ 0.32
CD3DP04234 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.03■□□□□ 0.32
CD3DP04234 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.03■□□□□ 0.32
CD3DP04234 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CD3DP04234 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD3DP04234 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.03■□□□□ 0.32
CD3DP04234 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.03■□□□□ 0.32
CD3DP04234 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD3DP04234 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD3DP04234 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.02■□□□□ 0.32
CD3DP04234 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CD3DP04234 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD3DP04234 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CD3DP04234 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.02■□□□□ 0.32
CD3DP04234 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD3DP04234 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CD3DP04234 MIR4466-201ENST00000606121 54 ntBASIC17.02■□□□□ 0.32
CD3DP04234 AC105233.4-201ENST00000642045 216 ntBASIC17.02■□□□□ 0.32
CD3DP04234 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD3DP04234 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD3DP04234 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CD3DP04234 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
CD3DP04234 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.01■□□□□ 0.31
CD3DP04234 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CD3DP04234 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CD3DP04234 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 AC126544.1-201ENST00000580842 1059 ntBASIC17.01■□□□□ 0.31
CD3DP04234 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.01■□□□□ 0.31
CD3DP04234 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CD3DP04234 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CD3DP04234 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.01■□□□□ 0.31
CD3DP04234 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.01■□□□□ 0.31
CD3DP04234 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.01■□□□□ 0.31
CD3DP04234 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CD3DP04234 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17■□□□□ 0.31
CD3DP04234 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD3DP04234 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CD3DP04234 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17■□□□□ 0.31
CD3DP04234 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD3DP04234 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17■□□□□ 0.31
CD3DP04234 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CD3DP04234 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CD3DP04234 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms