Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.44■□□□□ 0.86
MT-ND3P03897 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.44■□□□□ 0.86
MT-ND3P03897 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MT-ND3P03897 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
MT-ND3P03897 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
MT-ND3P03897 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.43■□□□□ 0.86
MT-ND3P03897 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.43■□□□□ 0.86
MT-ND3P03897 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.43■□□□□ 0.86
MT-ND3P03897 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
MT-ND3P03897 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
MT-ND3P03897 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MT-ND3P03897 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.43■□□□□ 0.86
MT-ND3P03897 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MT-ND3P03897 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.42■□□□□ 0.86
MT-ND3P03897 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND3P03897 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND3P03897 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND3P03897 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
MT-ND3P03897 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MT-ND3P03897 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MT-ND3P03897 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
MT-ND3P03897 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.42■□□□□ 0.86
MT-ND3P03897 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
MT-ND3P03897 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.42■□□□□ 0.86
MT-ND3P03897 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.42■□□□□ 0.86
MT-ND3P03897 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.42■□□□□ 0.86
MT-ND3P03897 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-ND3P03897 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
MT-ND3P03897 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-ND3P03897 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MT-ND3P03897 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 HLA-L-209ENST00000420110 1011 ntBASIC20.41■□□□□ 0.86
MT-ND3P03897 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.41■□□□□ 0.86
MT-ND3P03897 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-ND3P03897 RAP2CP1-201ENST00000605103 478 ntBASIC20.41■□□□□ 0.86
MT-ND3P03897 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-ND3P03897 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
MT-ND3P03897 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.41■□□□□ 0.86
MT-ND3P03897 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.41■□□□□ 0.86
MT-ND3P03897 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-ND3P03897 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-ND3P03897 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MT-ND3P03897 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-ND3P03897 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 AC245052.3-201ENST00000450182 901 ntBASIC20.4■□□□□ 0.86
MT-ND3P03897 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.4■□□□□ 0.86
MT-ND3P03897 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.4■□□□□ 0.86
MT-ND3P03897 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-ND3P03897 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-ND3P03897 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-ND3P03897 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.4■□□□□ 0.86
MT-ND3P03897 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.4■□□□□ 0.86
MT-ND3P03897 AC011767.1-201ENST00000617410 1153 ntBASIC20.4■□□□□ 0.86
MT-ND3P03897 AIRN-201ENST00000601203 4374 ntBASIC20.4■□□□□ 0.86
MT-ND3P03897 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-ND3P03897 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MT-ND3P03897 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
MT-ND3P03897 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms