Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
TIMP1P01033 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.92■■□□□ 1.1
TIMP1P01033 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.92■■□□□ 1.1
TIMP1P01033 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TIMP1P01033 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TIMP1P01033 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TIMP1P01033 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 TSPY14P-201ENST00000303979 915 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.91■■□□□ 1.1
TIMP1P01033 HLA-G-202ENST00000376815 851 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 HLA-G-203ENST00000376818 1127 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 MESTP1-201ENST00000404287 994 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 UPK3BP1-201ENST00000428678 509 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.91■■□□□ 1.1
TIMP1P01033 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.91■■□□□ 1.1
TIMP1P01033 AC091076.1-201ENST00000610741 619 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 MIR2861-201ENST00000636310 90 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
TIMP1P01033 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.91■■□□□ 1.1
TIMP1P01033 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.91■■□□□ 1.1
TIMP1P01033 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.91■■□□□ 1.1
TIMP1P01033 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.91■■□□□ 1.1
TIMP1P01033 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TIMP1P01033 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.9■■□□□ 1.1
TIMP1P01033 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TIMP1P01033 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.9■■□□□ 1.1
TIMP1P01033 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.9■■□□□ 1.1
TIMP1P01033 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TIMP1P01033 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TIMP1P01033 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TIMP1P01033 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TIMP1P01033 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.9■■□□□ 1.1
TIMP1P01033 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.9■■□□□ 1.1
TIMP1P01033 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TIMP1P01033 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.9■■□□□ 1.1
TIMP1P01033 AP005242.2-201ENST00000580065 1175 ntBASIC21.9■■□□□ 1.1
TIMP1P01033 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.9■■□□□ 1.1
TIMP1P01033 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.9■■□□□ 1.1
TIMP1P01033 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
TIMP1P01033 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.9■■□□□ 1.1
TIMP1P01033 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TIMP1P01033 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
TIMP1P01033 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TIMP1P01033 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.89■■□□□ 1.1
TIMP1P01033 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TIMP1P01033 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TIMP1P01033 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TIMP1P01033 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
TIMP1P01033 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
TIMP1P01033 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
TIMP1P01033 AK4P3-201ENST00000418260 669 ntBASIC21.89■■□□□ 1.09
TIMP1P01033 BX664615.1-201ENST00000443558 458 ntBASIC21.89■■□□□ 1.09
TIMP1P01033 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.89■■□□□ 1.09
TIMP1P01033 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.89■■□□□ 1.09
TIMP1P01033 AL358472.4-201ENST00000633140 710 ntBASIC21.89■■□□□ 1.09
TIMP1P01033 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.89■■□□□ 1.09
TIMP1P01033 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TIMP1P01033 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.89■■□□□ 1.09
TIMP1P01033 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.88■■□□□ 1.09
TIMP1P01033 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.88■■□□□ 1.09
TIMP1P01033 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.88■■□□□ 1.09
TIMP1P01033 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
TIMP1P01033 AC026271.3-201ENST00000571884 352 ntBASIC21.88■■□□□ 1.09
TIMP1P01033 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
TIMP1P01033 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.88■■□□□ 1.09
TIMP1P01033 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TIMP1P01033 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
TIMP1P01033 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.87■■□□□ 1.09
TIMP1P01033 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.87■■□□□ 1.09
TIMP1P01033 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.87■■□□□ 1.09
TIMP1P01033 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.87■■□□□ 1.09
TIMP1P01033 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TIMP1P01033 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TIMP1P01033 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TIMP1P01033 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.87■■□□□ 1.09
TIMP1P01033 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms